Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCUBE3Q8IX30 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 AC106886.1-201ENST00000568660 600 ntBASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 GNRHR2-203ENST00000581100 1187 ntBASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 FGD5P1-202ENST00000614866 2498 ntBASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.92■□□□□ 0.14
SCUBE3Q8IX30 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 AC004466.1-201ENST00000599515 1080 ntBASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SCUBE3Q8IX30 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.9■□□□□ 0.14
SCUBE3Q8IX30 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms