Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 SAMD11P1-201ENST00000571429 661 ntBASIC14.79□□□□□ -0.04
SGO1Q5FBB7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 AC022144.1-201ENST00000602255 1580 ntBASIC14.79□□□□□ -0.04
SGO1Q5FBB7 SRD5A3P1-201ENST00000603021 949 ntBASIC14.79□□□□□ -0.04
SGO1Q5FBB7 AC000095.1-201ENST00000603208 874 ntBASIC14.79□□□□□ -0.04
SGO1Q5FBB7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SGO1Q5FBB7 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 AC140479.7-201ENST00000636301 2332 ntBASIC14.78□□□□□ -0.04
SGO1Q5FBB7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 AC004890.2-204ENST00000481968 304 ntBASIC14.78□□□□□ -0.04
SGO1Q5FBB7 AC093214.1-201ENST00000511688 1107 ntBASIC14.78□□□□□ -0.04
SGO1Q5FBB7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 AC104794.3-201ENST00000566840 1248 ntBASIC14.78□□□□□ -0.04
SGO1Q5FBB7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 AL157414.3-201ENST00000624276 1954 ntBASIC14.78□□□□□ -0.04
SGO1Q5FBB7 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SGO1Q5FBB7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 AC005912.2-201ENST00000619492 2400 ntBASIC14.77□□□□□ -0.04
SGO1Q5FBB7 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SGO1Q5FBB7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms