Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 EIF4A2-207ENST00000443963 1729 ntTSL 1 (best)6.62□□□□□ -1.358e-8■□□□□ 8.6
RPS3P23396 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.378e-8■□□□□ 8.6
RPS3P23396 EIF4A2-211ENST00000465222 676 ntTSL 26.27□□□□□ -1.418e-8■□□□□ 8.6
RPS3P23396 EIF4A2-202ENST00000425053 1977 ntTSL 55.7□□□□□ -1.58e-8■□□□□ 8.6
RPS3P23396 EIF4A2-218ENST00000475653 909 ntTSL 25.61□□□□□ -1.518e-8■□□□□ 8.6
RPS3P23396 EIF4A2-204ENST00000429589 1005 ntTSL 55.6□□□□□ -1.518e-8■□□□□ 8.6
RPS3P23396 EIF4A2-210ENST00000465032 578 ntTSL 25.6□□□□□ -1.518e-8■□□□□ 8.6
RPS3P23396 EIF4A2-212ENST00000465267 1054 ntTSL 25.6□□□□□ -1.518e-8■□□□□ 8.6
RPS3P23396 EIF4A2-224ENST00000495049 576 ntTSL 25.6□□□□□ -1.518e-8■□□□□ 8.6
RPS3P23396 EIF4A2-221ENST00000491473 579 ntTSL 25.54□□□□□ -1.528e-8■□□□□ 8.6
RPS3P23396 EIF4A2-219ENST00000485101 5327 ntTSL 54.14□□□□□ -1.758e-8■□□□□ 8.6
RPS3P23396 EIF4A2-220ENST00000486805 590 ntTSL 22.97□□□□□ -1.938e-8■□□□□ 8.6
RPS3P23396 SNRPF-202ENST00000549580 757 ntTSL 21.55□□□□□ -2.168e-8■□□□□ 8.6
RPS3P23396 LRP1-212ENST00000556830 1847 ntTSL 212.29□□□□□ -0.445e-16■□□□□ 8.6
RPS3P23396 FASN-210ENST00000636968 100 ntTSL 516.24■□□□□ 0.193e-21■□□□□ 8.6
RPS3P23396 FASN-211ENST00000637026 100 ntTSL 59.27□□□□□ -0.933e-21■□□□□ 8.6
RPS3P23396 FASN-208ENST00000635733 100 ntTSL 58.42□□□□□ -1.063e-21■□□□□ 8.6
RPS3P23396 ATP5I-202ENST00000505852 300 ntTSL 29.59□□□□□ -0.871e-7■□□□□ 8.6
RPS3P23396 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -11e-7■□□□□ 8.6
RPS3P23396 PCSK6-211ENST00000559605 379 ntTSL 38.45□□□□□ -1.061e-7■□□□□ 8.6
RPS3P23396 PCSK6-213ENST00000560902 501 ntTSL 47.7□□□□□ -1.181e-7■□□□□ 8.6
RPS3P23396 SRSF1-206ENST00000583741 1465 ntTSL 519.46■□□□□ 0.712e-6■□□□□ 8.6
RPS3P23396 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.29■□□□□ 0.362e-6■□□□□ 8.6
RPS3P23396 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.352e-6■□□□□ 8.6
RPS3P23396 PSMD11-207ENST00000578397 1178 ntTSL 213.44□□□□□ -0.262e-9■□□□□ 8.6
RPS3P23396 SRSF1-202ENST00000578430 689 ntTSL 213.32□□□□□ -0.282e-6■□□□□ 8.6
RPS3P23396 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.831e-15■□□□□ 8.6
RPS3P23396 ICAM5-203ENST00000586480 2599 ntTSL 1 (best)20.13■□□□□ 0.811e-15■□□□□ 8.6
RPS3P23396 SPCS3-203ENST00000507678 2655 ntTSL 221.6■■□□□ 1.052e-7■□□□□ 8.5
RPS3P23396 VEGFA-217ENST00000518538 535 ntTSL 221.52■■□□□ 1.042e-7■□□□□ 8.5
RPS3P23396 CRELD2-205ENST00000444954 598 ntTSL 319.21■□□□□ 0.672e-7■□□□□ 8.5
RPS3P23396 SAFB-213ENST00000592555 1360 ntTSL 518.21■□□□□ 0.512e-7■□□□□ 8.5
RPS3P23396 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.8■□□□□ 0.442e-7■□□□□ 8.5
RPS3P23396 CRELD2-207ENST00000462253 471 ntTSL 517.31■□□□□ 0.362e-7■□□□□ 8.5
RPS3P23396 WSB1-206ENST00000578312 692 ntTSL 415.05■□□□□ -02e-7■□□□□ 8.5
RPS3P23396 WSB1-214ENST00000583742 544 ntTSL 415.05■□□□□ -02e-7■□□□□ 8.5
RPS3P23396 WSB1-217ENST00000584354 544 ntTSL 214.76□□□□□ -0.052e-7■□□□□ 8.5
RPS3P23396 SPCS3-204ENST00000513139 589 ntTSL 213.06□□□□□ -0.322e-7■□□□□ 8.5
RPS3P23396 SPTAN1-208ENST00000491712 714 ntTSL 213□□□□□ -0.332e-7■□□□□ 8.5
RPS3P23396 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC12.33□□□□□ -0.432e-7■□□□□ 8.5
RPS3P23396 WSB1-207ENST00000579733 1670 ntTSL 1 (best) BASIC12.22□□□□□ -0.452e-7■□□□□ 8.5
RPS3P23396 SAFB-210ENST00000591991 3471 ntTSL 211.6□□□□□ -0.552e-7■□□□□ 8.5
RPS3P23396 WSB1-203ENST00000427287 1149 ntTSL 2 BASIC11.53□□□□□ -0.562e-7■□□□□ 8.5
RPS3P23396 WSB1-213ENST00000583193 552 ntTSL 4 BASIC11.53□□□□□ -0.562e-7■□□□□ 8.5
RPS3P23396 WSB1-215ENST00000583786 481 ntTSL 511.3□□□□□ -0.62e-7■□□□□ 8.5
RPS3P23396 WSB1-209ENST00000581185 1900 ntTSL 2 BASIC10.52□□□□□ -0.732e-7■□□□□ 8.5
RPS3P23396 CLPTM1-207ENST00000587537 737 ntTSL 210.27□□□□□ -0.772e-7■□□□□ 8.5
RPS3P23396 WSB1-208ENST00000581089 697 ntTSL 210.12□□□□□ -0.792e-7■□□□□ 8.5
RPS3P23396 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.812e-7■□□□□ 8.5
RPS3P23396 WSB1-211ENST00000582208 625 ntTSL 39.73□□□□□ -0.852e-7■□□□□ 8.5
RPS3P23396 WSB1-210ENST00000581440 943 ntTSL 39.52□□□□□ -0.892e-7■□□□□ 8.5
RPS3P23396 MIR671-201ENST00000390183 118 ntBASIC9.3□□□□□ -0.922e-7■□□□□ 8.5
RPS3P23396 WSB1-204ENST00000467843 4187 ntTSL 1 (best)8.46□□□□□ -1.052e-7■□□□□ 8.5
RPS3P23396 GRB2-211ENST00000583912 561 ntTSL 48.46□□□□□ -1.062e-7■□□□□ 8.5
RPS3P23396 SPTAN1-238ENST00000637903 574 ntTSL 58.03□□□□□ -1.122e-7■□□□□ 8.5
RPS3P23396 ATP6AP2-223ENST00000637165 534 ntTSL 52.82□□□□□ -1.962e-7■□□□□ 8.5
RPS3P23396 P3H1-205ENST00000431412 836 ntTSL 59.02□□□□□ -0.971e-7■□□□□ 8.5
RPS3P23396 OCIAD1-211ENST00000507210 582 ntTSL 314.93□□□□□ -0.023e-8■□□□□ 8.5
RPS3P23396 OCIAD1-220ENST00000509963 432 ntTSL 212.85□□□□□ -0.353e-8■□□□□ 8.5
RPS3P23396 OCIAD1-228ENST00000514981 653 ntTSL 311.15□□□□□ -0.623e-8■□□□□ 8.5
RPS3P23396 OCIAD1-224ENST00000512236 594 ntTSL 39.03□□□□□ -0.963e-8■□□□□ 8.5
RPS3P23396 OCIAD1-225ENST00000512981 1209 ntTSL 48.98□□□□□ -0.973e-8■□□□□ 8.5
RPS3P23396 OCIAD1-221ENST00000510824 582 ntTSL 38.92□□□□□ -0.983e-8■□□□□ 8.5
RPS3P23396 OCIAD1-209ENST00000505922 555 ntTSL 57.13□□□□□ -1.273e-8■□□□□ 8.5
RPS3P23396 OCIAD1-207ENST00000503016 720 ntTSL 34.31□□□□□ -1.723e-8■□□□□ 8.5
RPS3P23396 OCIAD1-218ENST00000509246 495 ntTSL 23.85□□□□□ -1.793e-8■□□□□ 8.5
RPS3P23396 OCIAD1-208ENST00000504654 552 ntTSL 32.68□□□□□ -1.983e-8■□□□□ 8.5
RPS3P23396 OCIAD1-222ENST00000511102 688 ntTSL 22.68□□□□□ -1.983e-8■□□□□ 8.5
RPS3P23396 NFE2L1-206ENST00000577431 583 ntTSL 517.93■□□□□ 0.463e-8■□□□□ 8.5
RPS3P23396 NFE2L1-211ENST00000580050 476 ntTSL 417.93■□□□□ 0.463e-8■□□□□ 8.5
RPS3P23396 LGMN-214ENST00000557034 565 ntTSL 415.88■□□□□ 0.139e-13■□□□□ 8.5
RPS3P23396 P3H1-212ENST00000481465 728 ntTSL 210.84□□□□□ -0.679e-13■□□□□ 8.5
RPS3P23396 P3H1-206ENST00000447502 453 ntTSL 39.02□□□□□ -0.979e-13■□□□□ 8.5
RPS3P23396 STRN3-207ENST00000555358 2208 ntTSL 1 (best)23■■□□□ 1.271e-13■□□□□ 8.5
RPS3P23396 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.471e-13■□□□□ 8.5
RPS3P23396 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.47□□□□□ -0.091e-13■□□□□ 8.5
RPS3P23396 RPS8-206ENST00000484599 852 ntTSL 311.09□□□□□ -0.632e-11■□□□□ 8.5
RPS3P23396 RPS8-205ENST00000474582 391 ntTSL 1 (best)11.02□□□□□ -0.652e-11■□□□□ 8.5
RPS3P23396 RPS8-203ENST00000464658 898 ntTSL 28.8□□□□□ -12e-11■□□□□ 8.5
RPS3P23396 UBAP2L-212ENST00000465855 684 ntTSL 39.97□□□□□ -0.815e-6■□□□□ 8.5
RPS3P23396 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.58□□□□□ -1.045e-6■□□□□ 8.5
RPS3P23396 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC8.44□□□□□ -1.065e-6■□□□□ 8.5
RPS3P23396 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.245e-7■□□□□ 8.4
RPS3P23396 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.23■■□□□ 1.955e-7■□□□□ 8.4
RPS3P23396 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.6■■□□□ 1.855e-7■□□□□ 8.4
RPS3P23396 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.735e-7■□□□□ 8.4
RPS3P23396 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.93■■□□□ 1.265e-7■□□□□ 8.4
RPS3P23396 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 15e-7■□□□□ 8.4
RPS3P23396 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.835e-7■□□□□ 8.4
RPS3P23396 U2AF2-204ENST00000587275 554 ntTSL 419.23■□□□□ 0.675e-7■□□□□ 8.4
RPS3P23396 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.65e-7■□□□□ 8.4
RPS3P23396 RFK-204ENST00000479197 1501 ntTSL 1 (best)17.67■□□□□ 0.425e-7■□□□□ 8.4
RPS3P23396 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.23■□□□□ 0.355e-7■□□□□ 8.4
RPS3P23396 RFK-202ENST00000472900 753 ntTSL 317.09■□□□□ 0.335e-7■□□□□ 8.4
RPS3P23396 SLC25A39-215ENST00000592372 867 ntTSL 316.38■□□□□ 0.215e-7■□□□□ 8.4
RPS3P23396 CD55-202ENST00000343420 978 ntTSL 516.36■□□□□ 0.215e-7■□□□□ 8.4
RPS3P23396 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.195e-7■□□□□ 8.4
RPS3P23396 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.025e-7■□□□□ 8.4
RPS3P23396 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.82□□□□□ -0.045e-7■□□□□ 8.4
RPS3P23396 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.72□□□□□ -0.055e-7■□□□□ 8.4
Retrieved 100 of 24,271 protein–RNA pairs in 54.3 ms