RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-238ENST00000637903 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.93
SPTAN1-238ENST00000637903 ABCC9O60706 1549 aa18.77■□□□□ 0.6
SPTAN1-238ENST00000637903 CCDC180Q9P1Z9 1646 aa18.72■□□□□ 0.59
SPTAN1-238ENST00000637903 RB1CC1Q8TDY2 1594 aa17.85■□□□□ 0.45
SPTAN1-238ENST00000637903 DNAJC5BQ9UF47 199 aa17.74■□□□□ 0.43
SPTAN1-238ENST00000637903 NACADO15069 1562 aa17.74■□□□□ 0.43
SPTAN1-238ENST00000637903 DCAF8L2P0C7V8 631 aa17.56■□□□□ 0.4
SPTAN1-238ENST00000637903 MYO15BQ96JP2 1530 aa17.5■□□□□ 0.39
SPTAN1-238ENST00000637903 PABPN1Q86U42 306 aaKnown RBP eCLIP17.48■□□□□ 0.39
SPTAN1-238ENST00000637903 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
SPTAN1-238ENST00000637903 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
SPTAN1-238ENST00000637903 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
SPTAN1-238ENST00000637903 DCAF1Q9Y4B6 1507 aa17.23■□□□□ 0.35
SPTAN1-238ENST00000637903 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
SPTAN1-238ENST00000637903 SCRIBQ14160 1630 aa17■□□□□ 0.31
SPTAN1-238ENST00000637903 CC2D2AQ9P2K1 1620 aa16.97■□□□□ 0.31
SPTAN1-238ENST00000637903 CECR2Q9BXF3 1484 aa16.93■□□□□ 0.3
SPTAN1-238ENST00000637903 EIF4G1Q04637 1599 aaKnown RBP16.92■□□□□ 0.3
SPTAN1-238ENST00000637903 NCAPD3P42695 1498 aa16.39■□□□□ 0.21
SPTAN1-238ENST00000637903 DNAJC5Q9H3Z4 198 aa16.37■□□□□ 0.21
SPTAN1-238ENST00000637903 ATAD2BQ9ULI0 1458 aa16.31■□□□□ 0.2
SPTAN1-238ENST00000637903 CUX2O14529 1486 aa16.25■□□□□ 0.19
SPTAN1-238ENST00000637903 SMARCA4P51532 1647 aa16.25■□□□□ 0.19
SPTAN1-238ENST00000637903 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
SPTAN1-238ENST00000637903 HMGXB3Q12766 1538 aa16.23■□□□□ 0.19
SPTAN1-238ENST00000637903 ERCC6Q03468 1493 aa16.2■□□□□ 0.18
SPTAN1-238ENST00000637903 BAZ1AQ9NRL2 1556 aaPredicted RBP16.16■□□□□ 0.18
SPTAN1-238ENST00000637903 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
SPTAN1-238ENST00000637903 BAZ1BQ9UIG0 1483 aaKnown RBP16.11■□□□□ 0.17
SPTAN1-238ENST00000637903 NESP48681 1621 aa16.11■□□□□ 0.17
SPTAN1-238ENST00000637903 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
SPTAN1-238ENST00000637903 LAMC3Q9Y6N6 1575 aa16■□□□□ 0.15
SPTAN1-238ENST00000637903 THOC2Q8NI27 1593 aaKnown RBP15.96■□□□□ 0.15
SPTAN1-238ENST00000637903 PDS5BQ9NTI5 1447 aa15.92■□□□□ 0.14
SPTAN1-238ENST00000637903 KIF21AQ7Z4S6 1674 aa15.89■□□□□ 0.13
SPTAN1-238ENST00000637903 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
SPTAN1-238ENST00000637903 WIZO95785 1651 aa15.83■□□□□ 0.13
SPTAN1-238ENST00000637903 MRC2Q9UBG0 1479 aa15.77■□□□□ 0.11
SPTAN1-238ENST00000637903 WDR62O43379 1518 aa15.74■□□□□ 0.11
SPTAN1-238ENST00000637903 RSF1Q96T23 1441 aaPredicted RBP15.69■□□□□ 0.1
SPTAN1-238ENST00000637903 CFTRP13569 1480 aa15.68■□□□□ 0.1
SPTAN1-238ENST00000637903 CEP164Q9UPV0 1460 aa15.68■□□□□ 0.1
SPTAN1-238ENST00000637903 FANCD2Q9BXW9 1451 aa15.67■□□□□ 0.1
SPTAN1-238ENST00000637903 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
SPTAN1-238ENST00000637903 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
SPTAN1-238ENST00000637903 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
SPTAN1-238ENST00000637903 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
SPTAN1-238ENST00000637903 PRDM2Q13029 1718 aa15.49■□□□□ 0.07
SPTAN1-238ENST00000637903 CCDC88BA6NC98 1476 aa15.47■□□□□ 0.07
SPTAN1-238ENST00000637903 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
SPTAN1-238ENST00000637903 TOPBP1Q92547 1522 aa15.37■□□□□ 0.05
SPTAN1-238ENST00000637903 ZNF608Q9ULD9 1512 aaPredicted RBP15.37■□□□□ 0.05
SPTAN1-238ENST00000637903 ABCC8Q09428 1581 aa15.35■□□□□ 0.05
SPTAN1-238ENST00000637903 DNMBPQ6XZF7 1577 aa15.3■□□□□ 0.04
SPTAN1-238ENST00000637903 RIMBP3CA6NJZ7 1639 aa15.28■□□□□ 0.04
SPTAN1-238ENST00000637903 RIMBP3BA6NNM3 1639 aa15.28■□□□□ 0.04
SPTAN1-238ENST00000637903 RIMBP3Q9UFD9 1639 aa15.28■□□□□ 0.04
SPTAN1-238ENST00000637903 EIF4G3O43432 1585 aaKnown RBP15.26■□□□□ 0.03
SPTAN1-238ENST00000637903 TARBP1Q13395 1621 aaKnown RBP15.25■□□□□ 0.03
SPTAN1-238ENST00000637903 ARHGEF11O15085 1522 aa15.22■□□□□ 0.03
SPTAN1-238ENST00000637903 AQRO60306 1485 aaKnown RBP eCLIP15.22■□□□□ 0.033e-7■■□□□ 11.6
SPTAN1-238ENST00000637903 POLA1P09884 1462 aaPredicted RBP15.2■□□□□ 0.02
SPTAN1-238ENST00000637903 CHD1O14646 1710 aa15.16■□□□□ 0.02
SPTAN1-238ENST00000637903 SOGA1O94964 1423 aa15.14■□□□□ 0.01
SPTAN1-238ENST00000637903 RAD54L2Q9Y4B4 1467 aa15.14■□□□□ 0.01
SPTAN1-238ENST00000637903 CYB5RLQ6IPT4 315 aa15.12■□□□□ 0.01
SPTAN1-238ENST00000637903 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
SPTAN1-238ENST00000637903 FBLN2P98095 1184 aa15.1■□□□□ 0.01
SPTAN1-238ENST00000637903 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
SPTAN1-238ENST00000637903 FGD5Q6ZNL6 1462 aa15.08■□□□□ 0.01
SPTAN1-238ENST00000637903 ARAP1Q96P48 1450 aa15.08■□□□□ 0
SPTAN1-238ENST00000637903 CUX1P39880 1505 aa15.07■□□□□ 0
SPTAN1-238ENST00000637903 SNAPC4Q5SXM2 1469 aa15.05■□□□□ -0
SPTAN1-238ENST00000637903 MAGI1Q96QZ7 1491 aaPredicted RBP15.02■□□□□ -0
SPTAN1-238ENST00000637903 CLASP1Q7Z460 1538 aa15.02□□□□□ -0.01
SPTAN1-238ENST00000637903 GRIN2BQ13224 1484 aa15.01□□□□□ -0.01
SPTAN1-238ENST00000637903 CHMP7Q8WUX9 453 aaPredicted RBP15.01□□□□□ -0.01
SPTAN1-238ENST00000637903 SYNJ1O43426 1573 aa14.98□□□□□ -0.01
SPTAN1-238ENST00000637903 SYNJ2O15056 1496 aa14.97□□□□□ -0.01
SPTAN1-238ENST00000637903 TRHP20396 242 aaPredicted RBP14.95□□□□□ -0.02
SPTAN1-238ENST00000637903 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
SPTAN1-238ENST00000637903 ABCA10Q8WWZ4 1543 aa14.93□□□□□ -0.02
SPTAN1-238ENST00000637903 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
SPTAN1-238ENST00000637903 ABCA5Q8WWZ7 1642 aa14.9□□□□□ -0.02
SPTAN1-238ENST00000637903 SUPT5HO00267 1087 aaKnown RBP14.88□□□□□ -0.03
SPTAN1-238ENST00000637903 WRNQ14191 1432 aaPredicted RBP eCLIP14.85□□□□□ -0.03
SPTAN1-238ENST00000637903 GRIN2AQ12879 1464 aa14.82□□□□□ -0.04
SPTAN1-238ENST00000637903 TOP2BQ02880 1626 aa14.81□□□□□ -0.04
SPTAN1-238ENST00000637903 BIVM-ERCC5R4GMW8 1640 aa14.81□□□□□ -0.04
SPTAN1-238ENST00000637903 NUP160Q12769 1436 aa14.79□□□□□ -0.04
SPTAN1-238ENST00000637903 ADAMTS12P58397 1594 aa14.78□□□□□ -0.04
SPTAN1-238ENST00000637903 FHAD1B1AJZ9 1412 aa14.76□□□□□ -0.05
SPTAN1-238ENST00000637903 CEP170Q5SW79 1584 aa14.76□□□□□ -0.05
SPTAN1-238ENST00000637903 ERCC6L2Q5T890 1561 aa14.76□□□□□ -0.05
SPTAN1-238ENST00000637903 ERICH3Q5RHP9 1530 aa14.75□□□□□ -0.05
SPTAN1-238ENST00000637903 SHROOM2Q13796 1616 aa14.73□□□□□ -0.05
SPTAN1-238ENST00000637903 JPH4Q96JJ6 628 aa14.65□□□□□ -0.06
SPTAN1-238ENST00000637903 PRG4Q92954 1404 aaPredicted RBP14.63□□□□□ -0.07
SPTAN1-238ENST00000637903 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
SPTAN1-238ENST00000637903 RUSC2Q8N2Y8 1516 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 176.3 ms