RNA–Protein interactions for RNA: ENST00000591991.1

SAFB-210, Transcript of scaffold attachment factor B, humanhuman

TSL 2

Gene SAFB, Length 3,471 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-210ENST00000591991 NISCHQ9Y2I1 1504 aa24.41■■□□□ 1.5
SAFB-210ENST00000591991 SHROOM4Q9ULL8 1493 aa21.27■■□□□ 1
SAFB-210ENST00000591991 DCAF8L2P0C7V8 631 aa20.89■□□□□ 0.93
SAFB-210ENST00000591991 SUPT5HO00267 1087 aaKnown RBP20.86■□□□□ 0.93
SAFB-210ENST00000591991 ZCCHC6Q5VYS8 1495 aaKnown RBP20.59■□□□□ 0.89
SAFB-210ENST00000591991 CCDC180Q9P1Z9 1646 aa20.57■□□□□ 0.88
SAFB-210ENST00000591991 CHIC1Q5VXU3 224 aa20.01■□□□□ 0.79
SAFB-210ENST00000591991 MYO15BQ96JP2 1530 aa19.86■□□□□ 0.77
SAFB-210ENST00000591991 DCAF1Q9Y4B6 1507 aa19.81■□□□□ 0.76
SAFB-210ENST00000591991 SCRIBQ14160 1630 aa19.62■□□□□ 0.73
SAFB-210ENST00000591991 LOC105371045A0A1W2PR82 267 aa19.59■□□□□ 0.73
SAFB-210ENST00000591991 ABCC9O60706 1549 aa19.57■□□□□ 0.72
SAFB-210ENST00000591991 PCGF6Q9BYE7 350 aa19.54■□□□□ 0.72
SAFB-210ENST00000591991 RSF1Q96T23 1441 aaPredicted RBP19.38■□□□□ 0.69
SAFB-210ENST00000591991 EHMT2Q96KQ7 1210 aa19.37■□□□□ 0.69
SAFB-210ENST00000591991 FAM9AQ8IZU1 332 aaPredicted RBP19.36■□□□□ 0.69
SAFB-210ENST00000591991 TRIM41Q8WV44 630 aa19.31■□□□□ 0.68
SAFB-210ENST00000591991 HRCP23327 699 aa19.3■□□□□ 0.68
SAFB-210ENST00000591991 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
SAFB-210ENST00000591991 RB1CC1Q8TDY2 1594 aa19.18■□□□□ 0.66
SAFB-210ENST00000591991 NACADO15069 1562 aa19.15■□□□□ 0.66
SAFB-210ENST00000591991 PPARGC1BQ86YN6 1023 aaKnown RBP19.13■□□□□ 0.65
SAFB-210ENST00000591991 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
SAFB-210ENST00000591991 TRIM26Q12899 539 aaPredicted RBP18.99■□□□□ 0.63
SAFB-210ENST00000591991 WIZO95785 1651 aa18.94■□□□□ 0.62
SAFB-210ENST00000591991 PABPN1Q86U42 306 aaKnown RBP eCLIP18.86■□□□□ 0.61
SAFB-210ENST00000591991 BAZ1AQ9NRL2 1556 aaPredicted RBP18.74■□□□□ 0.59
SAFB-210ENST00000591991 TTBK1Q5TCY1 1321 aaPredicted RBP18.7■□□□□ 0.58
SAFB-210ENST00000591991 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
SAFB-210ENST00000591991 CCDC88BA6NC98 1476 aa18.59■□□□□ 0.57
SAFB-210ENST00000591991 SMARCA4P51532 1647 aa18.58■□□□□ 0.57
SAFB-210ENST00000591991 TOP2AP11388 1531 aaKnown RBP18.55■□□□□ 0.56
SAFB-210ENST00000591991 UNC13AQ9UPW8 1703 aa18.52■□□□□ 0.56
SAFB-210ENST00000591991 ZEB1P37275 1124 aaPredicted RBP18.49■□□□□ 0.55
SAFB-210ENST00000591991 UBTFP17480 764 aaKnown RBP18.49■□□□□ 0.55
SAFB-210ENST00000591991 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
SAFB-210ENST00000591991 SOGA1O94964 1423 aa18.45■□□□□ 0.54
SAFB-210ENST00000591991 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
SAFB-210ENST00000591991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.43■□□□□ 0.54
SAFB-210ENST00000591991 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
SAFB-210ENST00000591991 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
SAFB-210ENST00000591991 RUSC2Q8N2Y8 1516 aa18.36■□□□□ 0.53
SAFB-210ENST00000591991 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
SAFB-210ENST00000591991 BICRAQ9NZM4 1560 aa18.36■□□□□ 0.53
SAFB-210ENST00000591991 CEP162Q5TB80 1403 aa18.31■□□□□ 0.52
SAFB-210ENST00000591991 WRNQ14191 1432 aaPredicted RBP eCLIP18.27■□□□□ 0.51
SAFB-210ENST00000591991 TNIKQ9UKE5 1360 aa18.21■□□□□ 0.5
SAFB-210ENST00000591991 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
SAFB-210ENST00000591991 ATAD2BQ9ULI0 1458 aa18.19■□□□□ 0.5
SAFB-210ENST00000591991 EEA1Q15075 1411 aa18.15■□□□□ 0.5
SAFB-210ENST00000591991 GOLGA3Q08378 1498 aa18.13■□□□□ 0.49
SAFB-210ENST00000591991 SYNJ1O43426 1573 aa18.09■□□□□ 0.49
SAFB-210ENST00000591991 HNRNPUL2Q1KMD3 747 aaKnown RBP18.09■□□□□ 0.49
SAFB-210ENST00000591991 PEG3Q9GZU2 1588 aa18.06■□□□□ 0.48
SAFB-210ENST00000591991 APLP2Q06481 763 aa18.06■□□□□ 0.48
SAFB-210ENST00000591991 CEP164Q9UPV0 1460 aa18.01■□□□□ 0.47
SAFB-210ENST00000591991 CLIP1P30622 1438 aa18.01■□□□□ 0.47
SAFB-210ENST00000591991 PELP1Q8IZL8 1130 aaKnown RBP17.98■□□□□ 0.47
SAFB-210ENST00000591991 RAPGEF2Q9Y4G8 1499 aa17.96■□□□□ 0.47
SAFB-210ENST00000591991 DIEXFQ68CQ4 756 aaKnown RBP17.9■□□□□ 0.46
SAFB-210ENST00000591991 KIF21BO75037 1637 aa17.85■□□□□ 0.45
SAFB-210ENST00000591991 VPS8Q8N3P4 1428 aa17.84■□□□□ 0.45
SAFB-210ENST00000591991 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
SAFB-210ENST00000591991 TOP2BQ02880 1626 aa17.79■□□□□ 0.44
SAFB-210ENST00000591991 NCAPD3P42695 1498 aa17.77■□□□□ 0.44
SAFB-210ENST00000591991 ITGAEP38570 1179 aa17.73■□□□□ 0.43
SAFB-210ENST00000591991 ZNF316A6NFI3 1004 aaPredicted RBP17.72■□□□□ 0.43
SAFB-210ENST00000591991 CUX1P39880 1505 aa17.72■□□□□ 0.43
SAFB-210ENST00000591991 KANK4Q5T7N3 995 aaPredicted RBP17.71■□□□□ 0.43
SAFB-210ENST00000591991 KIF27Q86VH2 1401 aa17.7■□□□□ 0.42
SAFB-210ENST00000591991 YTHDC1Q96MU7 727 aaKnown RBP17.7■□□□□ 0.42
SAFB-210ENST00000591991 NEUROD1Q13562 356 aa17.69■□□□□ 0.42
SAFB-210ENST00000591991 HMGXB3Q12766 1538 aa17.69■□□□□ 0.42
SAFB-210ENST00000591991 BIVM-ERCC5R4GMW8 1640 aa17.66■□□□□ 0.42
SAFB-210ENST00000591991 PRXQ9BXM0 1461 aa17.65■□□□□ 0.42
SAFB-210ENST00000591991 ATP1B4Q9UN42 357 aaPredicted RBP17.65■□□□□ 0.42
SAFB-210ENST00000591991 CFTRP13569 1480 aa17.64■□□□□ 0.41
SAFB-210ENST00000591991 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.41
SAFB-210ENST00000591991 CENPBP07199 599 aaPredicted RBP17.62■□□□□ 0.41
SAFB-210ENST00000591991 CUX2O14529 1486 aa17.61■□□□□ 0.41
SAFB-210ENST00000591991 ARAP1Q96P48 1450 aa17.61■□□□□ 0.41
SAFB-210ENST00000591991 P3H3Q8IVL6 736 aa17.61■□□□□ 0.41
SAFB-210ENST00000591991 ERICH3Q5RHP9 1530 aa17.57■□□□□ 0.4
SAFB-210ENST00000591991 CADPSQ9ULU8 1353 aa17.55■□□□□ 0.4
SAFB-210ENST00000591991 GTF3C3Q9Y5Q9 886 aa17.55■□□□□ 0.4
SAFB-210ENST00000591991 MIER1Q8N108 512 aa17.53■□□□□ 0.4
SAFB-210ENST00000591991 IGF1RP08069 1367 aa17.5■□□□□ 0.39
SAFB-210ENST00000591991 ARHGAP35Q9NRY4 1499 aa17.49■□□□□ 0.39
SAFB-210ENST00000591991 CARMIL1Q5VZK9 1371 aa17.49■□□□□ 0.39
SAFB-210ENST00000591991 FGD5Q6ZNL6 1462 aa17.48■□□□□ 0.39
SAFB-210ENST00000591991 FAM50AQ14320 339 aaKnown RBP17.45■□□□□ 0.38
SAFB-210ENST00000591991 DHX57Q6P158 1386 aaKnown RBP17.44■□□□□ 0.38
SAFB-210ENST00000591991 CC2D2AQ9P2K1 1620 aa17.43■□□□□ 0.38
SAFB-210ENST00000591991 CCNB3Q8WWL7 1395 aa17.42■□□□□ 0.38
SAFB-210ENST00000591991 FANCD2Q9BXW9 1451 aa17.4■□□□□ 0.38
SAFB-210ENST00000591991 RAD54L2Q9Y4B4 1467 aa17.39■□□□□ 0.37
SAFB-210ENST00000591991 NESP48681 1621 aa17.38■□□□□ 0.37
SAFB-210ENST00000591991 MYT1Q01538 1121 aa17.34■□□□□ 0.37
SAFB-210ENST00000591991 RRBP1Q9P2E9 1410 aaKnown RBP17.34■□□□□ 0.37
SAFB-210ENST00000591991 FHOD3Q2V2M9 1422 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms