RNA–Protein interactions for RNA: ENST00000491712.2

SPTAN1-208, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 714 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-208ENST00000491712 NISCHQ9Y2I1 1504 aa33.25■■■□□ 2.91
SPTAN1-208ENST00000491712 CCDC180Q9P1Z9 1646 aa29.82■■■□□ 2.36
SPTAN1-208ENST00000491712 ABCC9O60706 1549 aa29.46■■■□□ 2.31
SPTAN1-208ENST00000491712 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
SPTAN1-208ENST00000491712 NACADO15069 1562 aa28.11■■■□□ 2.09
SPTAN1-208ENST00000491712 DCAF8L2P0C7V8 631 aa27.95■■■□□ 2.06
SPTAN1-208ENST00000491712 MYO15BQ96JP2 1530 aa27.82■■■□□ 2.04
SPTAN1-208ENST00000491712 ZCCHC6Q5VYS8 1495 aaKnown RBP27.62■■■□□ 2.01
SPTAN1-208ENST00000491712 UNC13AQ9UPW8 1703 aa27.55■■■□□ 2
SPTAN1-208ENST00000491712 DCAF1Q9Y4B6 1507 aa27.53■■■□□ 2
SPTAN1-208ENST00000491712 PABPN1Q86U42 306 aaKnown RBP eCLIP27.43■■□□□ 1.98
SPTAN1-208ENST00000491712 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
SPTAN1-208ENST00000491712 DNAJC5BQ9UF47 199 aa27.27■■□□□ 1.96
SPTAN1-208ENST00000491712 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
SPTAN1-208ENST00000491712 SCRIBQ14160 1630 aa27.12■■□□□ 1.93
SPTAN1-208ENST00000491712 EIF4G1Q04637 1599 aaKnown RBP26.68■■□□□ 1.86
SPTAN1-208ENST00000491712 CC2D2AQ9P2K1 1620 aa26.65■■□□□ 1.86
SPTAN1-208ENST00000491712 CECR2Q9BXF3 1484 aa26.55■■□□□ 1.84
SPTAN1-208ENST00000491712 SMARCA4P51532 1647 aa25.91■■□□□ 1.74
SPTAN1-208ENST00000491712 NCAPD3P42695 1498 aa25.9■■□□□ 1.74
SPTAN1-208ENST00000491712 SMARCA2P51531 1590 aa25.86■■□□□ 1.73
SPTAN1-208ENST00000491712 BAZ1AQ9NRL2 1556 aaPredicted RBP25.86■■□□□ 1.73
SPTAN1-208ENST00000491712 ATAD2BQ9ULI0 1458 aa25.84■■□□□ 1.73
SPTAN1-208ENST00000491712 HMGXB3Q12766 1538 aa25.78■■□□□ 1.72
SPTAN1-208ENST00000491712 BAZ1BQ9UIG0 1483 aaKnown RBP25.66■■□□□ 1.7
SPTAN1-208ENST00000491712 PEG3Q9GZU2 1588 aa25.66■■□□□ 1.7
SPTAN1-208ENST00000491712 MROH2BQ7Z745 1585 aa25.58■■□□□ 1.69
SPTAN1-208ENST00000491712 ERCC6Q03468 1493 aa25.52■■□□□ 1.68
SPTAN1-208ENST00000491712 CUX2O14529 1486 aa25.38■■□□□ 1.65
SPTAN1-208ENST00000491712 NESP48681 1621 aa25.34■■□□□ 1.65
SPTAN1-208ENST00000491712 LAMC3Q9Y6N6 1575 aa25.34■■□□□ 1.65
SPTAN1-208ENST00000491712 WIZO95785 1651 aa25.31■■□□□ 1.64
SPTAN1-208ENST00000491712 PDS5BQ9NTI5 1447 aa25.18■■□□□ 1.62
SPTAN1-208ENST00000491712 RSF1Q96T23 1441 aaPredicted RBP25.16■■□□□ 1.62
SPTAN1-208ENST00000491712 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
SPTAN1-208ENST00000491712 THOC2Q8NI27 1593 aaKnown RBP25.1■■□□□ 1.61
SPTAN1-208ENST00000491712 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
SPTAN1-208ENST00000491712 TOP2AP11388 1531 aaKnown RBP25.07■■□□□ 1.6
SPTAN1-208ENST00000491712 DNAJC5Q9H3Z4 198 aa24.98■■□□□ 1.59
SPTAN1-208ENST00000491712 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
SPTAN1-208ENST00000491712 CFTRP13569 1480 aa24.89■■□□□ 1.58
SPTAN1-208ENST00000491712 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.58
SPTAN1-208ENST00000491712 FANCD2Q9BXW9 1451 aa24.85■■□□□ 1.57
SPTAN1-208ENST00000491712 WDR62O43379 1518 aa24.84■■□□□ 1.57
SPTAN1-208ENST00000491712 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
SPTAN1-208ENST00000491712 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
SPTAN1-208ENST00000491712 URB2Q14146 1524 aaKnown RBP24.58■■□□□ 1.53
SPTAN1-208ENST00000491712 ABCC8Q09428 1581 aa24.46■■□□□ 1.51
SPTAN1-208ENST00000491712 TOPBP1Q92547 1522 aa24.39■■□□□ 1.49
SPTAN1-208ENST00000491712 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
SPTAN1-208ENST00000491712 DNMBPQ6XZF7 1577 aa24.37■■□□□ 1.49
SPTAN1-208ENST00000491712 SUPT5HO00267 1087 aaKnown RBP24.23■■□□□ 1.47
SPTAN1-208ENST00000491712 OSCARQ8IYS5 282 aa24.23■■□□□ 1.47
SPTAN1-208ENST00000491712 ZNF608Q9ULD9 1512 aaPredicted RBP24.22■■□□□ 1.47
SPTAN1-208ENST00000491712 EIF4G3O43432 1585 aaKnown RBP24.18■■□□□ 1.46
SPTAN1-208ENST00000491712 POLA1P09884 1462 aaPredicted RBP24.16■■□□□ 1.46
SPTAN1-208ENST00000491712 TARBP1Q13395 1621 aaKnown RBP24.15■■□□□ 1.46
SPTAN1-208ENST00000491712 SOGA1O94964 1423 aa24.06■■□□□ 1.44
SPTAN1-208ENST00000491712 WDR97A6NE52 1622 aa24.05■■□□□ 1.44
SPTAN1-208ENST00000491712 FGD5Q6ZNL6 1462 aa24.05■■□□□ 1.44
SPTAN1-208ENST00000491712 AQRO60306 1485 aaKnown RBP eCLIP24.04■■□□□ 1.441e-7■□□□□ 11
SPTAN1-208ENST00000491712 CUX1P39880 1505 aa24.04■■□□□ 1.44
SPTAN1-208ENST00000491712 RAD54L2Q9Y4B4 1467 aa24.01■■□□□ 1.43
SPTAN1-208ENST00000491712 TRIM41Q8WV44 630 aa24.01■■□□□ 1.43
SPTAN1-208ENST00000491712 CHD1O14646 1710 aa23.95■■□□□ 1.42
SPTAN1-208ENST00000491712 TDRD9Q8NDG6 1382 aaKnown RBP23.94■■□□□ 1.42
SPTAN1-208ENST00000491712 FBLN2P98095 1184 aa23.89■■□□□ 1.41
SPTAN1-208ENST00000491712 RIMBP3CA6NJZ7 1639 aa23.87■■□□□ 1.41
SPTAN1-208ENST00000491712 RIMBP3BA6NNM3 1639 aa23.87■■□□□ 1.41
SPTAN1-208ENST00000491712 RIMBP3Q9UFD9 1639 aa23.87■■□□□ 1.41
SPTAN1-208ENST00000491712 GRIN2BQ13224 1484 aa23.86■■□□□ 1.41
SPTAN1-208ENST00000491712 SNAPC4Q5SXM2 1469 aa23.86■■□□□ 1.41
SPTAN1-208ENST00000491712 MAGI1Q96QZ7 1491 aaPredicted RBP23.85■■□□□ 1.41
SPTAN1-208ENST00000491712 ARHGEF11O15085 1522 aa23.83■■□□□ 1.41
SPTAN1-208ENST00000491712 ABCA10Q8WWZ4 1543 aa23.8■■□□□ 1.4
SPTAN1-208ENST00000491712 GAPVD1Q14C86 1478 aa23.8■■□□□ 1.4
SPTAN1-208ENST00000491712 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
SPTAN1-208ENST00000491712 WRNQ14191 1432 aaPredicted RBP eCLIP23.79■■□□□ 1.4
SPTAN1-208ENST00000491712 BIVM-ERCC5R4GMW8 1640 aa23.78■■□□□ 1.4
SPTAN1-208ENST00000491712 CHMP7Q8WUX9 453 aaPredicted RBP23.78■■□□□ 1.4
SPTAN1-208ENST00000491712 TOP2BQ02880 1626 aa23.77■■□□□ 1.4
SPTAN1-208ENST00000491712 ABCA5Q8WWZ7 1642 aa23.75■■□□□ 1.39
SPTAN1-208ENST00000491712 SYNJ2O15056 1496 aa23.75■■□□□ 1.39
SPTAN1-208ENST00000491712 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
SPTAN1-208ENST00000491712 CLASP1Q7Z460 1538 aa23.65■■□□□ 1.38
SPTAN1-208ENST00000491712 CYB5RLQ6IPT4 315 aa23.6■■□□□ 1.37
SPTAN1-208ENST00000491712 ARAP1Q96P48 1450 aa23.57■■□□□ 1.36
SPTAN1-208ENST00000491712 ADAMTS12P58397 1594 aa23.57■■□□□ 1.36
SPTAN1-208ENST00000491712 ERICH3Q5RHP9 1530 aa23.54■■□□□ 1.36
SPTAN1-208ENST00000491712 GRIN2AQ12879 1464 aa23.54■■□□□ 1.36
SPTAN1-208ENST00000491712 FHAD1B1AJZ9 1412 aa23.51■■□□□ 1.35
SPTAN1-208ENST00000491712 NUP160Q12769 1436 aa23.42■■□□□ 1.34
SPTAN1-208ENST00000491712 CEP170Q5SW79 1584 aa23.41■■□□□ 1.34
SPTAN1-208ENST00000491712 KIF27Q86VH2 1401 aa23.35■■□□□ 1.33
SPTAN1-208ENST00000491712 TRHP20396 242 aaPredicted RBP23.32■■□□□ 1.32
SPTAN1-208ENST00000491712 SHROOM2Q13796 1616 aa23.31■■□□□ 1.32
SPTAN1-208ENST00000491712 CUL7Q14999 1698 aa23.28■■□□□ 1.32
SPTAN1-208ENST00000491712 ERCC6L2Q5T890 1561 aa23.23■■□□□ 1.31
SPTAN1-208ENST00000491712 RUSC2Q8N2Y8 1516 aa23.23■■□□□ 1.31
SPTAN1-208ENST00000491712 IGF1RP08069 1367 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms