RNA–Protein interactions for RNA: ENST00000592555.1

SAFB-213, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 1,360 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-213ENST00000592555 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
SAFB-213ENST00000592555 CCDC180Q9P1Z9 1646 aa38.41■■■■□ 3.74
SAFB-213ENST00000592555 ABCC9O60706 1549 aa36.87■■■■□ 3.49
SAFB-213ENST00000592555 ZCCHC6Q5VYS8 1495 aaKnown RBP36.34■■■■□ 3.41
SAFB-213ENST00000592555 DCAF1Q9Y4B6 1507 aa36.11■■■■□ 3.37
SAFB-213ENST00000592555 MYO15BQ96JP2 1530 aa36.08■■■■□ 3.37
SAFB-213ENST00000592555 NACADO15069 1562 aa36.02■■■■□ 3.36
SAFB-213ENST00000592555 DCAF8L2P0C7V8 631 aa36.01■■■■□ 3.35
SAFB-213ENST00000592555 RB1CC1Q8TDY2 1594 aa35.87■■■■□ 3.33
SAFB-213ENST00000592555 SCRIBQ14160 1630 aa34.96■■■■□ 3.19
SAFB-213ENST00000592555 UNC13AQ9UPW8 1703 aa34.89■■■■□ 3.18
SAFB-213ENST00000592555 BICRAQ9NZM4 1560 aa34.66■■■■□ 3.14
SAFB-213ENST00000592555 SHROOM4Q9ULL8 1493 aa34.59■■■■□ 3.13
SAFB-213ENST00000592555 PABPN1Q86U42 306 aaKnown RBP eCLIP34.55■■■■□ 3.12
SAFB-213ENST00000592555 EIF4G1Q04637 1599 aaKnown RBP33.73■■■□□ 2.99
SAFB-213ENST00000592555 CECR2Q9BXF3 1484 aa33.7■■■□□ 2.99
SAFB-213ENST00000592555 BAZ1AQ9NRL2 1556 aaPredicted RBP33.7■■■□□ 2.98
SAFB-213ENST00000592555 SMARCA4P51532 1647 aa33.58■■■□□ 2.97
SAFB-213ENST00000592555 MROH2BQ7Z745 1585 aa33.45■■■□□ 2.95
SAFB-213ENST00000592555 CC2D2AQ9P2K1 1620 aa33.42■■■□□ 2.94
SAFB-213ENST00000592555 RSF1Q96T23 1441 aaPredicted RBP33.34■■■□□ 2.93
SAFB-213ENST00000592555 SMARCA2P51531 1590 aa33.32■■■□□ 2.92
SAFB-213ENST00000592555 PEG3Q9GZU2 1588 aa33.31■■■□□ 2.92
SAFB-213ENST00000592555 ATAD2BQ9ULI0 1458 aa33.26■■■□□ 2.92
SAFB-213ENST00000592555 DNAJC5BQ9UF47 199 aa33.24■■■□□ 2.91
SAFB-213ENST00000592555 NCAPD3P42695 1498 aa33.22■■■□□ 2.91
SAFB-213ENST00000592555 HMGXB3Q12766 1538 aa33.1■■■□□ 2.89
SAFB-213ENST00000592555 WIZO95785 1651 aa33.08■■■□□ 2.89
SAFB-213ENST00000592555 BAZ1BQ9UIG0 1483 aaKnown RBP33.04■■■□□ 2.88
SAFB-213ENST00000592555 SUPT5HO00267 1087 aaKnown RBP32.89■■■□□ 2.86
SAFB-213ENST00000592555 TOP2AP11388 1531 aaKnown RBP32.87■■■□□ 2.85
SAFB-213ENST00000592555 CCDC88BA6NC98 1476 aa32.45■■■□□ 2.79
SAFB-213ENST00000592555 CADPSQ9ULU8 1353 aa32.27■■■□□ 2.76
SAFB-213ENST00000592555 LAMC3Q9Y6N6 1575 aa32.23■■■□□ 2.75
SAFB-213ENST00000592555 CFTRP13569 1480 aa32.2■■■□□ 2.74
SAFB-213ENST00000592555 NESP48681 1621 aa32.06■■■□□ 2.72
SAFB-213ENST00000592555 PDS5BQ9NTI5 1447 aa32.03■■■□□ 2.72
SAFB-213ENST00000592555 PRDM2Q13029 1718 aa31.93■■■□□ 2.7
SAFB-213ENST00000592555 FANCD2Q9BXW9 1451 aa31.85■■■□□ 2.69
SAFB-213ENST00000592555 ERCC6Q03468 1493 aa31.81■■■□□ 2.68
SAFB-213ENST00000592555 CEP164Q9UPV0 1460 aa31.77■■■□□ 2.68
SAFB-213ENST00000592555 KIF21AQ7Z4S6 1674 aa31.69■■■□□ 2.66
SAFB-213ENST00000592555 MRC2Q9UBG0 1479 aa31.6■■■□□ 2.65
SAFB-213ENST00000592555 ABCC8Q09428 1581 aa31.59■■■□□ 2.65
SAFB-213ENST00000592555 THOC2Q8NI27 1593 aaKnown RBP31.49■■■□□ 2.63
SAFB-213ENST00000592555 WDR62O43379 1518 aa31.47■■■□□ 2.63
SAFB-213ENST00000592555 WRNQ14191 1432 aaPredicted RBP eCLIP31.45■■■□□ 2.63
SAFB-213ENST00000592555 DNMBPQ6XZF7 1577 aa31.44■■■□□ 2.62
SAFB-213ENST00000592555 URB2Q14146 1524 aaKnown RBP31.44■■■□□ 2.62
SAFB-213ENST00000592555 TOPBP1Q92547 1522 aa31.4■■■□□ 2.62
SAFB-213ENST00000592555 CUX1P39880 1505 aa31.34■■■□□ 2.61
SAFB-213ENST00000592555 CUX2O14529 1486 aa31.33■■■□□ 2.61
SAFB-213ENST00000592555 TOP2BQ02880 1626 aa31.3■■■□□ 2.6
SAFB-213ENST00000592555 BIVM-ERCC5R4GMW8 1640 aa31.28■■■□□ 2.6
SAFB-213ENST00000592555 SYNJ1O43426 1573 aa31.23■■■□□ 2.59
SAFB-213ENST00000592555 FGD5Q6ZNL6 1462 aa31.17■■■□□ 2.58
SAFB-213ENST00000592555 POLA1P09884 1462 aaPredicted RBP31.16■■■□□ 2.58
SAFB-213ENST00000592555 TRIM41Q8WV44 630 aa31.15■■■□□ 2.58
SAFB-213ENST00000592555 IFT140Q96RY7 1462 aa31.12■■■□□ 2.57
SAFB-213ENST00000592555 CHIC1Q5VXU3 224 aa31.1■■■□□ 2.57
SAFB-213ENST00000592555 SOGA1O94964 1423 aa31.1■■■□□ 2.57
SAFB-213ENST00000592555 TARBP1Q13395 1621 aaKnown RBP30.99■■■□□ 2.55
SAFB-213ENST00000592555 RAD54L2Q9Y4B4 1467 aa30.96■■■□□ 2.55
SAFB-213ENST00000592555 ABCA10Q8WWZ4 1543 aa30.96■■■□□ 2.55
SAFB-213ENST00000592555 WDR97A6NE52 1622 aa30.94■■■□□ 2.54
SAFB-213ENST00000592555 KIF27Q86VH2 1401 aa30.8■■■□□ 2.52
SAFB-213ENST00000592555 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
SAFB-213ENST00000592555 TDRD9Q8NDG6 1382 aaKnown RBP30.77■■■□□ 2.52
SAFB-213ENST00000592555 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
SAFB-213ENST00000592555 ABCA5Q8WWZ7 1642 aa30.72■■■□□ 2.51
SAFB-213ENST00000592555 AQRO60306 1485 aaKnown RBP eCLIP30.72■■■□□ 2.517e-9■■■■■ 31.6
SAFB-213ENST00000592555 EIF4G3O43432 1585 aaKnown RBP30.72■■■□□ 2.51
SAFB-213ENST00000592555 EEA1Q15075 1411 aa30.69■■■□□ 2.5
SAFB-213ENST00000592555 GRIN2BQ13224 1484 aa30.68■■■□□ 2.5
SAFB-213ENST00000592555 ERICH3Q5RHP9 1530 aa30.62■■■□□ 2.49
SAFB-213ENST00000592555 MAGI1Q96QZ7 1491 aaPredicted RBP30.55■■■□□ 2.48
SAFB-213ENST00000592555 PBRM1Q86U86 1689 aa30.55■■■□□ 2.48
SAFB-213ENST00000592555 IGF1RP08069 1367 aa30.54■■■□□ 2.48
SAFB-213ENST00000592555 RUSC2Q8N2Y8 1516 aa30.51■■■□□ 2.48
SAFB-213ENST00000592555 CSRNP3Q8WYN3 585 aa30.47■■■□□ 2.47
SAFB-213ENST00000592555 SNAPC4Q5SXM2 1469 aa30.47■■■□□ 2.47
SAFB-213ENST00000592555 CUL7Q14999 1698 aa30.45■■■□□ 2.47
SAFB-213ENST00000592555 FHAD1B1AJZ9 1412 aa30.45■■■□□ 2.46
SAFB-213ENST00000592555 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
SAFB-213ENST00000592555 CARMIL1Q5VZK9 1371 aa30.4■■■□□ 2.46
SAFB-213ENST00000592555 ADAMTS12P58397 1594 aa30.38■■■□□ 2.45
SAFB-213ENST00000592555 CHMP7Q8WUX9 453 aaPredicted RBP30.35■■■□□ 2.45
SAFB-213ENST00000592555 FAM9AQ8IZU1 332 aaPredicted RBP30.34■■■□□ 2.45
SAFB-213ENST00000592555 PRXQ9BXM0 1461 aa30.31■■■□□ 2.44
SAFB-213ENST00000592555 RAPGEF2Q9Y4G8 1499 aa30.29■■■□□ 2.44
SAFB-213ENST00000592555 FBLN2P98095 1184 aa30.26■■■□□ 2.43
SAFB-213ENST00000592555 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
SAFB-213ENST00000592555 KIF21BO75037 1637 aa30.2■■■□□ 2.43
SAFB-213ENST00000592555 CHD1O14646 1710 aa30.17■■■□□ 2.42
SAFB-213ENST00000592555 OSCARQ8IYS5 282 aa30.15■■■□□ 2.42
SAFB-213ENST00000592555 NUP160Q12769 1436 aa30.11■■■□□ 2.41
SAFB-213ENST00000592555 GOLGA3Q08378 1498 aa30.09■■■□□ 2.41
SAFB-213ENST00000592555 KIAA0586Q9BVV6 1533 aa30.01■■■□□ 2.39
SAFB-213ENST00000592555 CEP170Q5SW79 1584 aa30■■■□□ 2.39
SAFB-213ENST00000592555 UBTFP17480 764 aaKnown RBP29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms