Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 MEP1AP4-201ENST00000423244 1087 ntBASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 FAM86LP-201ENST00000478302 853 ntBASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 AC004066.1-201ENST00000502488 802 ntBASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 FTH1-202ENST00000526640 786 ntTSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 GPX4-206ENST00000588919 803 ntTSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 AC011467.4-201ENST00000594891 528 ntBASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 AL359258.3-201ENST00000622910 2331 ntBASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 REXO1L4P-201ENST00000605109 1937 ntBASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 CLK3P2-201ENST00000427566 1453 ntBASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 RET-205ENST00000615310 4337 ntTSL 5 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC11.05□□□□□ -0.64
TRGV1A0A0A0MS02 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 RPL13AP25-201ENST00000484130 612 ntBASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 AC104596.2-201ENST00000512793 793 ntBASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 RARRES2P5-201ENST00000564013 466 ntBASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 SAMD11P1-201ENST00000571429 661 ntBASIC11.04□□□□□ -0.64
TRGV1A0A0A0MS02 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms