Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC44A1Q8WWI5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 AC254562.1-201ENST00000417586 456 ntBASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 DNAJB3-202ENST00000449667 1266 ntBASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 AC027612.4-201ENST00000605371 583 ntBASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 AL158212.4-201ENST00000624062 1286 ntBASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
SLC44A1Q8WWI5 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 AC087499.5-201ENST00000452760 1342 ntBASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 AL158070.2-201ENST00000623713 1621 ntBASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 AL353779.1-201ENST00000434793 351 ntBASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 HLA-J-203ENST00000494367 1087 ntBASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 TIMM17BP1-201ENST00000545713 516 ntBASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms