Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 AC004987.2-201ENST00000395959 1148 ntBASIC11.5□□□□□ -0.57
MRPL54Q6P161 RBM17P3-201ENST00000417687 1192 ntBASIC11.5□□□□□ -0.57
MRPL54Q6P161 TPT1P11-201ENST00000458482 498 ntBASIC11.5□□□□□ -0.57
MRPL54Q6P161 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 AL031432.2-201ENST00000566714 459 ntBASIC11.5□□□□□ -0.57
MRPL54Q6P161 AL928711.1-201ENST00000570165 459 ntBASIC11.5□□□□□ -0.57
MRPL54Q6P161 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 ACTL9-202ENST00000612068 1252 ntBASIC11.5□□□□□ -0.57
MRPL54Q6P161 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 EML1-203ENST00000334192 4064 ntTSL 5 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC11.5□□□□□ -0.57
MRPL54Q6P161 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
MRPL54Q6P161 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 RCN1P1-201ENST00000400413 996 ntBASIC11.49□□□□□ -0.57
MRPL54Q6P161 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 GHSR-202ENST00000427970 912 ntBASIC11.49□□□□□ -0.57
MRPL54Q6P161 FIS1-203ENST00000442303 631 ntTSL 3 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 PHKG1P2-201ENST00000457537 863 ntBASIC11.49□□□□□ -0.57
MRPL54Q6P161 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 SART3-203ENST00000546611 1184 ntBASIC11.49□□□□□ -0.57
MRPL54Q6P161 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 AC138894.3-201ENST00000603787 634 ntBASIC11.49□□□□□ -0.57
MRPL54Q6P161 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
MRPL54Q6P161 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
MRPL54Q6P161 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms