Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.34□□□□□ -0.27
RAB3BP20337 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 LILRP1-201ENST00000444199 1370 ntBASIC13.34□□□□□ -0.27
RAB3BP20337 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RAB3BP20337 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB3BP20337 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 AP3S2-216ENST00000617003 1561 ntBASIC13.34□□□□□ -0.27
RAB3BP20337 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC13.34□□□□□ -0.27
RAB3BP20337 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB3BP20337 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 AC022447.6-201ENST00000515522 438 ntBASIC13.34□□□□□ -0.27
RAB3BP20337 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.34□□□□□ -0.27
RAB3BP20337 DMBT1P1-203ENST00000636837 4628 ntBASIC13.34□□□□□ -0.27
RAB3BP20337 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.34□□□□□ -0.27
RAB3BP20337 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
RAB3BP20337 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAB3BP20337 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.34□□□□□ -0.27
RAB3BP20337 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB3BP20337 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RAB3BP20337 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB3BP20337 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB3BP20337 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB3BP20337 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB3BP20337 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
RAB3BP20337 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB3BP20337 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
RAB3BP20337 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB3BP20337 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 AC131212.3-201ENST00000624087 4219 ntBASIC13.33□□□□□ -0.28
RAB3BP20337 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
RAB3BP20337 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
RAB3BP20337 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
RAB3BP20337 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.33□□□□□ -0.28
RAB3BP20337 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
RAB3BP20337 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB3BP20337 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB3BP20337 AL133267.1-201ENST00000398220 340 ntBASIC13.33□□□□□ -0.28
RAB3BP20337 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
RAB3BP20337 KRT18P2-201ENST00000447938 1258 ntBASIC13.33□□□□□ -0.28
RAB3BP20337 AC079781.3-201ENST00000449110 356 ntBASIC13.33□□□□□ -0.28
RAB3BP20337 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.33□□□□□ -0.28
RAB3BP20337 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.33□□□□□ -0.28
RAB3BP20337 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB3BP20337 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.33□□□□□ -0.28
RAB3BP20337 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.33□□□□□ -0.28
RAB3BP20337 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.33□□□□□ -0.28
RAB3BP20337 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.33□□□□□ -0.28
RAB3BP20337 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.33□□□□□ -0.28
RAB3BP20337 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.33□□□□□ -0.28
RAB3BP20337 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
RAB3BP20337 TK1-203ENST00000588734 1681 ntTSL 2 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms