Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 AC008735.3-201ENST00000596646 500 ntBASIC12.53□□□□□ -0.4
CCL3L1P16619 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL3L1P16619 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.53□□□□□ -0.4
CCL3L1P16619 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC12.53□□□□□ -0.4
CCL3L1P16619 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
CCL3L1P16619 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC12.53□□□□□ -0.4
CCL3L1P16619 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CCL3L1P16619 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
CCL3L1P16619 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CCL3L1P16619 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CCL3L1P16619 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
CCL3L1P16619 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL3L1P16619 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CCL3L1P16619 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL3L1P16619 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CCL3L1P16619 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL3L1P16619 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL3L1P16619 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.52□□□□□ -0.4
CCL3L1P16619 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CCL3L1P16619 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CCL3L1P16619 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL3L1P16619 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CCL3L1P16619 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
CCL3L1P16619 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL3L1P16619 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL3L1P16619 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CCL3L1P16619 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.52□□□□□ -0.4
CCL3L1P16619 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.52□□□□□ -0.41
CCL3L1P16619 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CCL3L1P16619 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL3L1P16619 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.52□□□□□ -0.41
CCL3L1P16619 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
CCL3L1P16619 ACTBP8-201ENST00000403258 1108 ntBASIC12.52□□□□□ -0.41
CCL3L1P16619 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.52□□□□□ -0.41
CCL3L1P16619 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL3L1P16619 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL3L1P16619 AC106760.1-201ENST00000508690 800 ntBASIC12.52□□□□□ -0.41
CCL3L1P16619 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL3L1P16619 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.52□□□□□ -0.41
CCL3L1P16619 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.52□□□□□ -0.41
CCL3L1P16619 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CCL3L1P16619 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL3L1P16619 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
CCL3L1P16619 AC007686.3-201ENST00000619017 3487 ntBASIC12.52□□□□□ -0.41
CCL3L1P16619 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL3L1P16619 OR2I1P-210ENST00000642037 4691 ntBASIC12.52□□□□□ -0.41
CCL3L1P16619 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
CCL3L1P16619 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL3L1P16619 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL3L1P16619 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.52□□□□□ -0.41
CCL3L1P16619 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CCL3L1P16619 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CCL3L1P16619 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.52□□□□□ -0.41
CCL3L1P16619 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.51□□□□□ -0.41
CCL3L1P16619 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL3L1P16619 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.51□□□□□ -0.41
CCL3L1P16619 AC055811.4-201ENST00000624039 1754 ntBASIC12.51□□□□□ -0.41
CCL3L1P16619 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3L1P16619 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.51□□□□□ -0.41
CCL3L1P16619 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCL3L1P16619 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL3L1P16619 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CCL3L1P16619 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.51□□□□□ -0.41
CCL3L1P16619 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms