Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC13.51□□□□□ -0.25
APOC1P02654 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.51□□□□□ -0.25
APOC1P02654 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.51□□□□□ -0.25
APOC1P02654 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.51□□□□□ -0.25
APOC1P02654 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.51□□□□□ -0.25
APOC1P02654 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC1P02654 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
APOC1P02654 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
APOC1P02654 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
APOC1P02654 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.51□□□□□ -0.25
APOC1P02654 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
APOC1P02654 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
APOC1P02654 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.5□□□□□ -0.25
APOC1P02654 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.5□□□□□ -0.25
APOC1P02654 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
APOC1P02654 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.5□□□□□ -0.25
APOC1P02654 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.5□□□□□ -0.25
APOC1P02654 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.5□□□□□ -0.25
APOC1P02654 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.5□□□□□ -0.25
APOC1P02654 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
APOC1P02654 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.5□□□□□ -0.25
APOC1P02654 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.5□□□□□ -0.25
APOC1P02654 AC025181.2-201ENST00000606994 802 ntBASIC13.5□□□□□ -0.25
APOC1P02654 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.5□□□□□ -0.25
APOC1P02654 AC004461.2-201ENST00000629517 803 ntBASIC13.5□□□□□ -0.25
APOC1P02654 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.5□□□□□ -0.25
APOC1P02654 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
APOC1P02654 AF228730.6-201ENST00000641497 218 ntBASIC13.5□□□□□ -0.25
APOC1P02654 AC084121.3-201ENST00000641716 218 ntBASIC13.5□□□□□ -0.25
APOC1P02654 AL109936.8-201ENST00000641772 604 ntBASIC13.5□□□□□ -0.25
APOC1P02654 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
APOC1P02654 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
APOC1P02654 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.5□□□□□ -0.25
APOC1P02654 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.5□□□□□ -0.25
APOC1P02654 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC1P02654 LINC00528-201ENST00000600723 2160 ntBASIC13.49□□□□□ -0.25
APOC1P02654 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC1P02654 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
APOC1P02654 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
APOC1P02654 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.49□□□□□ -0.25
APOC1P02654 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC1P02654 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 AC091951.1-201ENST00000512854 2465 ntBASIC13.49□□□□□ -0.25
APOC1P02654 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.49□□□□□ -0.25
APOC1P02654 CICP11-201ENST00000434745 2827 ntBASIC13.49□□□□□ -0.25
APOC1P02654 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
APOC1P02654 AL139400.1-201ENST00000366220 510 ntBASIC13.49□□□□□ -0.25
APOC1P02654 AC104457.1-201ENST00000401024 814 ntBASIC13.49□□□□□ -0.25
APOC1P02654 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms