Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 AC142381.1-201ENST00000426099 345 ntBASIC14.39□□□□□ -0.11
AP4S1Q9Y587 AF186996.4-201ENST00000467186 377 ntBASIC14.39□□□□□ -0.11
AP4S1Q9Y587 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 KRT18P21-201ENST00000515767 1272 ntBASIC14.39□□□□□ -0.11
AP4S1Q9Y587 PRELID1P1-202ENST00000567272 903 ntBASIC14.39□□□□□ -0.11
AP4S1Q9Y587 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 AC027307.2-201ENST00000591252 911 ntBASIC14.39□□□□□ -0.11
AP4S1Q9Y587 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 AL354702.1-201ENST00000442006 1960 ntBASIC14.39□□□□□ -0.11
AP4S1Q9Y587 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 AC015818.8-201ENST00000587907 1519 ntBASIC14.39□□□□□ -0.11
AP4S1Q9Y587 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 BCAR1-209ENST00000546196 1340 ntBASIC14.39□□□□□ -0.11
AP4S1Q9Y587 CTBP1-AS2-206ENST00000581398 5652 ntBASIC14.39□□□□□ -0.11
AP4S1Q9Y587 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP4S1Q9Y587 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 AC002056.1-201ENST00000395613 760 ntBASIC14.38□□□□□ -0.11
AP4S1Q9Y587 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 AC009947.1-201ENST00000444350 727 ntBASIC14.38□□□□□ -0.11
AP4S1Q9Y587 TMEM198B-204ENST00000484016 896 ntBASIC14.38□□□□□ -0.11
AP4S1Q9Y587 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.38□□□□□ -0.11
AP4S1Q9Y587 RARRES2P8-201ENST00000566335 367 ntBASIC14.38□□□□□ -0.11
AP4S1Q9Y587 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 AC004877.2-201ENST00000623941 599 ntBASIC14.38□□□□□ -0.11
AP4S1Q9Y587 AC008267.7-201ENST00000624570 1194 ntBASIC14.38□□□□□ -0.11
AP4S1Q9Y587 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP4S1Q9Y587 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 LILRP1-201ENST00000444199 1370 ntBASIC14.37□□□□□ -0.11
AP4S1Q9Y587 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.37□□□□□ -0.11
AP4S1Q9Y587 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms