Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 Z97205.2-201ENST00000564697 1639 ntBASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 PTENP1-202ENST00000532280 3996 ntBASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 AC104457.1-201ENST00000401024 814 ntBASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 AC015922.1-201ENST00000421102 1152 ntBASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 AC005829.1-201ENST00000570002 483 ntBASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COMMD4Q9H0A8 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COMMD4Q9H0A8 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.46□□□□□ -0.26
COMMD4Q9H0A8 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.46□□□□□ -0.26
COMMD4Q9H0A8 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COMMD4Q9H0A8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COMMD4Q9H0A8 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
COMMD4Q9H0A8 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COMMD4Q9H0A8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
COMMD4Q9H0A8 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
COMMD4Q9H0A8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 HSPA7-201ENST00000445535 1927 ntBASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 AL627223.1-201ENST00000416693 442 ntBASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 AC074338.1-201ENST00000416825 156 ntBASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 YBX1P5-201ENST00000509441 847 ntBASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 AL079307.3-201ENST00000556114 283 ntBASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 AC006504.5-208ENST00000588784 2401 ntBASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
COMMD4Q9H0A8 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms