Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 AC012508.2-201ENST00000567613 1472 ntBASIC13.38□□□□□ -0.27
ATF1P18846 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ATF1P18846 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
ATF1P18846 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
ATF1P18846 SERBP1P3-201ENST00000459980 809 ntBASIC13.38□□□□□ -0.27
ATF1P18846 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ATF1P18846 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.38□□□□□ -0.27
ATF1P18846 AC015910.1-201ENST00000579400 975 ntBASIC13.38□□□□□ -0.27
ATF1P18846 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.38□□□□□ -0.27
ATF1P18846 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.38□□□□□ -0.27
ATF1P18846 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.38□□□□□ -0.27
ATF1P18846 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
ATF1P18846 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.38□□□□□ -0.27
ATF1P18846 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.38□□□□□ -0.27
ATF1P18846 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.38□□□□□ -0.27
ATF1P18846 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.38□□□□□ -0.27
ATF1P18846 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.38□□□□□ -0.27
ATF1P18846 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
ATF1P18846 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ATF1P18846 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.37□□□□□ -0.27
ATF1P18846 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.37□□□□□ -0.27
ATF1P18846 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.37□□□□□ -0.27
ATF1P18846 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.37□□□□□ -0.27
ATF1P18846 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
ATF1P18846 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 RPSAP43-201ENST00000402237 625 ntBASIC13.37□□□□□ -0.27
ATF1P18846 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.37□□□□□ -0.27
ATF1P18846 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.37□□□□□ -0.27
ATF1P18846 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 Z97205.2-201ENST00000564697 1639 ntBASIC13.37□□□□□ -0.27
ATF1P18846 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATF1P18846 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ATF1P18846 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ATF1P18846 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.37□□□□□ -0.27
ATF1P18846 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ATF1P18846 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.37□□□□□ -0.27
ATF1P18846 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.37□□□□□ -0.27
ATF1P18846 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
ATF1P18846 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.37□□□□□ -0.27
ATF1P18846 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
ATF1P18846 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
ATF1P18846 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ATF1P18846 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.36□□□□□ -0.27
ATF1P18846 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
ATF1P18846 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
ATF1P18846 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.36□□□□□ -0.27
ATF1P18846 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ATF1P18846 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ATF1P18846 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms