Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TVP23AA6NH52 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TVP23AA6NH52 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 AL844908.2-201ENST00000609461 460 ntBASIC13.62□□□□□ -0.23
TVP23AA6NH52 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 AC093028.1-201ENST00000622998 982 ntBASIC13.62□□□□□ -0.23
TVP23AA6NH52 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.62□□□□□ -0.23
TVP23AA6NH52 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 AC087499.5-201ENST00000452760 1342 ntBASIC13.62□□□□□ -0.23
TVP23AA6NH52 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TVP23AA6NH52 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TVP23AA6NH52 AC097359.2-201ENST00000604992 2389 ntBASIC13.61□□□□□ -0.23
TVP23AA6NH52 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TVP23AA6NH52 AC104457.1-201ENST00000401024 814 ntBASIC13.61□□□□□ -0.23
TVP23AA6NH52 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 AC097493.3-201ENST00000509725 367 ntBASIC13.61□□□□□ -0.23
TVP23AA6NH52 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TVP23AA6NH52 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms