Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARBP10826 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARBP10826 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
RARBP10826 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.93■□□□□ 0.3
RARBP10826 AC092978.1-202ENST00000637590 1327 ntBASIC16.93■□□□□ 0.3
RARBP10826 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARBP10826 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.93■□□□□ 0.3
RARBP10826 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARBP10826 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARBP10826 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RARBP10826 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RARBP10826 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.92■□□□□ 0.3
RARBP10826 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RARBP10826 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RARBP10826 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RARBP10826 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
RARBP10826 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RARBP10826 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
RARBP10826 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.92■□□□□ 0.3
RARBP10826 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.92■□□□□ 0.3
RARBP10826 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.92■□□□□ 0.3
RARBP10826 RPL17P11-201ENST00000417593 544 ntBASIC16.92■□□□□ 0.3
RARBP10826 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.92■□□□□ 0.3
RARBP10826 PUDPP3-201ENST00000445368 636 ntBASIC16.92■□□□□ 0.3
RARBP10826 AL353637.1-201ENST00000451571 732 ntBASIC16.92■□□□□ 0.3
RARBP10826 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.92■□□□□ 0.3
RARBP10826 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RARBP10826 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.92■□□□□ 0.3
RARBP10826 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.92■□□□□ 0.3
RARBP10826 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.92■□□□□ 0.3
RARBP10826 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.92■□□□□ 0.3
RARBP10826 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 AC009955.4-201ENST00000597192 544 ntBASIC16.92■□□□□ 0.3
RARBP10826 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.92■□□□□ 0.3
RARBP10826 AL353770.1-201ENST00000614915 403 ntBASIC16.92■□□□□ 0.3
RARBP10826 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.92■□□□□ 0.3
RARBP10826 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.92■□□□□ 0.3
RARBP10826 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RARBP10826 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RARBP10826 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.92■□□□□ 0.3
RARBP10826 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.92■□□□□ 0.3
RARBP10826 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RARBP10826 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.91■□□□□ 0.3
RARBP10826 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RARBP10826 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 AC112504.1-201ENST00000623415 1841 ntBASIC16.91■□□□□ 0.3
RARBP10826 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RARBP10826 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RARBP10826 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
RARBP10826 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 RN7SKP175-201ENST00000408472 289 ntBASIC16.91■□□□□ 0.3
RARBP10826 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.91■□□□□ 0.3
RARBP10826 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.91■□□□□ 0.3
RARBP10826 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.91■□□□□ 0.3
RARBP10826 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.91■□□□□ 0.3
RARBP10826 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.91■□□□□ 0.3
RARBP10826 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.91■□□□□ 0.3
RARBP10826 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.91■□□□□ 0.3
RARBP10826 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.91■□□□□ 0.3
RARBP10826 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC16.91■□□□□ 0.3
RARBP10826 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RARBP10826 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.91■□□□□ 0.3
RARBP10826 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms