Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 PCDHA3-202ENST00000532566 4594 ntBASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 KRT8P22-201ENST00000562317 1415 ntBASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC162PA2VCL2 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 PIN1P1-201ENST00000412108 996 ntBASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 HMGN1P19-201ENST00000436976 333 ntBASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 AP001582.1-201ENST00000525856 295 ntBASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 AC190387.1-201ENST00000551683 408 ntBASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 CTBP2P3-201ENST00000585629 1255 ntBASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 BX539320.1-201ENST00000623759 877 ntBASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CCDC162PA2VCL2 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 AL645937.2-201ENST00000396808 931 ntBASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC162PA2VCL2 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms