Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 FAM58BP-201ENST00000439056 645 ntBASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 AC253536.4-201ENST00000440539 267 ntBASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 AL596276.2-201ENST00000447525 331 ntBASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 AC125604.1-201ENST00000496255 707 ntBASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 PRKXP1-201ENST00000561423 1122 ntBASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 AC090164.2-201ENST00000611487 516 ntBASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 AC068587.6-202ENST00000641839 5619 ntBASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CCDC187A0A096LP49 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 AC009955.4-201ENST00000597192 544 ntBASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 U62317.3-201ENST00000608319 855 ntBASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.32□□□□□ -0.12
CCDC187A0A096LP49 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms