Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 AL157407.1-201ENST00000435784 904 ntBASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 VDAC1P1-201ENST00000439229 848 ntBASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 HLA-J-204ENST00000495278 958 ntBASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 AL606495.2-201ENST00000605867 535 ntBASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 AC090164.2-201ENST00000611487 516 ntBASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 AC006486.2-201ENST00000624246 2199 ntBASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYNPO2Q9UMS6 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SYNPO2Q9UMS6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SYNPO2Q9UMS6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SYNPO2Q9UMS6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.27■□□□□ 0.35
SYNPO2Q9UMS6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
SYNPO2Q9UMS6 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SYNPO2Q9UMS6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 MRPL37P1-201ENST00000592451 1337 ntBASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 AC005077.2-201ENST00000449786 690 ntBASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 ACTG1P17-201ENST00000558391 1119 ntBASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 SNORD3B-2-202ENST00000571722 791 ntBASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 AL590440.2-201ENST00000641973 1595 ntBASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.26■□□□□ 0.35
SYNPO2Q9UMS6 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 RPL18P13-201ENST00000478088 569 ntBASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 AC026740.1-201ENST00000607068 791 ntBASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SYNPO2Q9UMS6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 SLC25A24P2-201ENST00000415059 510 ntBASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.24■□□□□ 0.35
SYNPO2Q9UMS6 AC104073.2-201ENST00000453737 312 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms