Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 AL136379.1-201ENST00000623471 2642 ntBASIC13.52□□□□□ -0.25
RTTNQ86VV8 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 AC099548.2-209ENST00000480264 625 ntBASIC13.52□□□□□ -0.25
RTTNQ86VV8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 AC097359.2-201ENST00000604992 2389 ntBASIC13.52□□□□□ -0.25
RTTNQ86VV8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RTTNQ86VV8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.52□□□□□ -0.25
RTTNQ86VV8 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 AC074044.1-201ENST00000609673 707 ntBASIC13.51□□□□□ -0.25
RTTNQ86VV8 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 MIR6869-201ENST00000619434 62 ntBASIC13.51□□□□□ -0.25
RTTNQ86VV8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 AC018529.2-202ENST00000611482 3087 ntBASIC13.51□□□□□ -0.25
RTTNQ86VV8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.51□□□□□ -0.25
RTTNQ86VV8 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RTTNQ86VV8 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
RTTNQ86VV8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RTTNQ86VV8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms