Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.81□□□□□ -0.04
KRT6AP02538 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.81□□□□□ -0.04
KRT6AP02538 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6AP02538 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.81□□□□□ -0.04
KRT6AP02538 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.81□□□□□ -0.04
KRT6AP02538 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
KRT6AP02538 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.81□□□□□ -0.04
KRT6AP02538 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.81□□□□□ -0.04
KRT6AP02538 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.81□□□□□ -0.04
KRT6AP02538 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.81□□□□□ -0.04
KRT6AP02538 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 LINC00552-201ENST00000625151 2579 ntBASIC14.81□□□□□ -0.04
KRT6AP02538 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6AP02538 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
KRT6AP02538 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6AP02538 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
KRT6AP02538 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.81□□□□□ -0.04
KRT6AP02538 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
KRT6AP02538 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6AP02538 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
KRT6AP02538 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6AP02538 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6AP02538 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
KRT6AP02538 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 SUN1-204ENST00000403868 978 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.8□□□□□ -0.04
KRT6AP02538 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.8□□□□□ -0.04
KRT6AP02538 AC009477.1-201ENST00000452936 217 ntBASIC14.8□□□□□ -0.04
KRT6AP02538 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
KRT6AP02538 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6AP02538 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.8□□□□□ -0.04
KRT6AP02538 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.8□□□□□ -0.04
KRT6AP02538 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 AL158212.4-201ENST00000624062 1286 ntBASIC14.8□□□□□ -0.04
KRT6AP02538 KRT18P28-201ENST00000453838 1332 ntBASIC14.8□□□□□ -0.04
KRT6AP02538 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
KRT6AP02538 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6AP02538 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6AP02538 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
KRT6AP02538 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.8□□□□□ -0.04
KRT6AP02538 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.8□□□□□ -0.04
KRT6AP02538 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
KRT6AP02538 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.79□□□□□ -0.04
KRT6AP02538 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KRT6AP02538 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KRT6AP02538 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms