Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL844908.2-201ENST00000609461 460 ntBASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
FOXP3Q9BZS1 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 MTHFR-210ENST00000641407 2387 ntBASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 AC138969.3-201ENST00000546612 1459 ntBASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 AC138932.2-201ENST00000548268 1459 ntBASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 AC126755.4-201ENST00000549796 1459 ntBASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
FOXP3Q9BZS1 C8orf49-201ENST00000525043 1968 ntBASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 AC087499.5-201ENST00000452760 1342 ntBASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
FOXP3Q9BZS1 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 COX5BP8-201ENST00000416911 349 ntBASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 AL132655.2-201ENST00000596276 594 ntBASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 AL133215.2-201ENST00000609242 977 ntBASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 AC007541.1-201ENST00000570282 1469 ntBASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 AC015802.1-201ENST00000588104 1449 ntBASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.75■□□□□ 0.11
FOXP3Q9BZS1 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
FOXP3Q9BZS1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms