Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
NDUFAF3Q9BU61 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 AC002056.1-201ENST00000395613 760 ntBASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 LBH-203ENST00000404397 543 ntTSL 4 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 METTL21AP1-201ENST00000438852 635 ntBASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 AP000344.2-201ENST00000512987 629 ntBASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 MMP17-203ENST00000535004 719 ntTSL 3 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 MIR4515-201ENST00000584082 81 ntBASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 U82695.1-201ENST00000635752 1889 ntBASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
NDUFAF3Q9BU61 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
NDUFAF3Q9BU61 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
NDUFAF3Q9BU61 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC11.9□□□□□ -0.51
NDUFAF3Q9BU61 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
NDUFAF3Q9BU61 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.9□□□□□ -0.51
NDUFAF3Q9BU61 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
NDUFAF3Q9BU61 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 VMO1-203ENST00000416307 712 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.89□□□□□ -0.51
NDUFAF3Q9BU61 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms