Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.94□□□□□ -0.18
CLPXO76031 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.94□□□□□ -0.18
CLPXO76031 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLPXO76031 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLPXO76031 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.94□□□□□ -0.18
CLPXO76031 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLPXO76031 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLPXO76031 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLPXO76031 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLPXO76031 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CLPXO76031 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
CLPXO76031 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
CLPXO76031 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.93□□□□□ -0.18
CLPXO76031 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLPXO76031 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CLPXO76031 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
CLPXO76031 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.93□□□□□ -0.18
CLPXO76031 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLPXO76031 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CLPXO76031 RPSAP43-201ENST00000402237 625 ntBASIC13.93□□□□□ -0.18
CLPXO76031 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.93□□□□□ -0.18
CLPXO76031 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.93□□□□□ -0.18
CLPXO76031 GPX1P2-201ENST00000429271 606 ntBASIC13.93□□□□□ -0.18
CLPXO76031 SLC25A6P2-201ENST00000497974 877 ntBASIC13.93□□□□□ -0.18
CLPXO76031 RNA5SP416-201ENST00000516838 111 ntBASIC13.93□□□□□ -0.18
CLPXO76031 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.93□□□□□ -0.18
CLPXO76031 UNC93B6-202ENST00000528242 690 ntBASIC13.93□□□□□ -0.18
CLPXO76031 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.93□□□□□ -0.18
CLPXO76031 MIR3687-2-201ENST00000577708 61 ntBASIC13.93□□□□□ -0.18
CLPXO76031 AC005412.3-201ENST00000580309 715 ntBASIC13.93□□□□□ -0.18
CLPXO76031 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CLPXO76031 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
CLPXO76031 MIR3687-1-201ENST00000614492 61 ntBASIC13.93□□□□□ -0.18
CLPXO76031 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
CLPXO76031 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CLPXO76031 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CLPXO76031 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CLPXO76031 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.92□□□□□ -0.18
CLPXO76031 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CLPXO76031 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.92□□□□□ -0.18
CLPXO76031 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.92□□□□□ -0.18
CLPXO76031 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.92□□□□□ -0.18
CLPXO76031 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 YBX2P1-201ENST00000394192 760 ntBASIC13.92□□□□□ -0.18
CLPXO76031 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.92□□□□□ -0.18
CLPXO76031 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.92□□□□□ -0.18
CLPXO76031 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.92□□□□□ -0.18
CLPXO76031 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.92□□□□□ -0.18
CLPXO76031 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.92□□□□□ -0.18
CLPXO76031 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.92□□□□□ -0.18
CLPXO76031 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.92□□□□□ -0.18
CLPXO76031 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.92□□□□□ -0.18
CLPXO76031 AC055717.3-201ENST00000622967 595 ntBASIC13.92□□□□□ -0.18
CLPXO76031 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.92□□□□□ -0.18
CLPXO76031 AC079781.4-201ENST00000641908 219 ntBASIC13.92□□□□□ -0.18
CLPXO76031 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CLPXO76031 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
CLPXO76031 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CLPXO76031 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.92□□□□□ -0.18
CLPXO76031 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CLPXO76031 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.92□□□□□ -0.18
CLPXO76031 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.92□□□□□ -0.18
CLPXO76031 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.92□□□□□ -0.18
CLPXO76031 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms