Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC1A1P43005 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SLC1A1P43005 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
SLC1A1P43005 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 BX640514.1-201ENST00000583223 1918 ntBASIC15.96■□□□□ 0.15
SLC1A1P43005 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC1A1P43005 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
SLC1A1P43005 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SLC1A1P43005 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC1A1P43005 RPL13AP25-201ENST00000484130 612 ntBASIC15.96■□□□□ 0.15
SLC1A1P43005 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
SLC1A1P43005 SPDYE18-201ENST00000510091 1050 ntBASIC15.96■□□□□ 0.15
SLC1A1P43005 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.96■□□□□ 0.15
SLC1A1P43005 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC1A1P43005 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 AC004840.1-201ENST00000636359 365 ntBASIC15.96■□□□□ 0.15
SLC1A1P43005 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SLC1A1P43005 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 AL158070.2-201ENST00000623713 1621 ntBASIC15.96■□□□□ 0.15
SLC1A1P43005 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
SLC1A1P43005 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC1A1P43005 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC1A1P43005 AC018665.1-201ENST00000622927 1362 ntBASIC15.96■□□□□ 0.15
SLC1A1P43005 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SLC1A1P43005 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC1A1P43005 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC1A1P43005 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
SLC1A1P43005 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC1A1P43005 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
SLC1A1P43005 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC1A1P43005 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
SLC1A1P43005 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC1A1P43005 INTS4P1-203ENST00000641008 3683 ntBASIC15.96■□□□□ 0.14
SLC1A1P43005 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC1A1P43005 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC1A1P43005 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC1A1P43005 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC1A1P43005 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC1A1P43005 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC1A1P43005 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SLC1A1P43005 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
SLC1A1P43005 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC1A1P43005 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 NUS1P3-201ENST00000423502 862 ntBASIC15.95■□□□□ 0.14
SLC1A1P43005 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC1A1P43005 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC1A1P43005 HLA-K-203ENST00000430151 1046 ntBASIC15.95■□□□□ 0.14
SLC1A1P43005 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC1A1P43005 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC1A1P43005 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC1A1P43005 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC1A1P43005 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC1A1P43005 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.95■□□□□ 0.14
SLC1A1P43005 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.95■□□□□ 0.14
SLC1A1P43005 AL390754.1-201ENST00000619088 582 ntBASIC15.95■□□□□ 0.14
SLC1A1P43005 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC1A1P43005 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC1A1P43005 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC1A1P43005 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC1A1P43005 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SLC1A1P43005 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms