Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC16.34■□□□□ 0.21
HOXC8P31273 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.34■□□□□ 0.21
HOXC8P31273 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.34■□□□□ 0.21
HOXC8P31273 AC090857.1-201ENST00000527400 390 ntBASIC16.34■□□□□ 0.21
HOXC8P31273 RTN3P1-201ENST00000536295 711 ntBASIC16.34■□□□□ 0.21
HOXC8P31273 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.34■□□□□ 0.21
HOXC8P31273 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.34■□□□□ 0.21
HOXC8P31273 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.34■□□□□ 0.21
HOXC8P31273 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.34■□□□□ 0.21
HOXC8P31273 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.34■□□□□ 0.21
HOXC8P31273 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HOXC8P31273 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.34■□□□□ 0.21
HOXC8P31273 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HOXC8P31273 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HOXC8P31273 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HOXC8P31273 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.34■□□□□ 0.21
HOXC8P31273 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC8P31273 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC8P31273 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HOXC8P31273 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.33■□□□□ 0.2
HOXC8P31273 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HOXC8P31273 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXC8P31273 PTPA-215ENST00000432124 567 ntTSL 4 BASIC16.33■□□□□ 0.2
HOXC8P31273 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXC8P31273 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXC8P31273 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXC8P31273 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXC8P31273 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXC8P31273 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.33■□□□□ 0.2
HOXC8P31273 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXC8P31273 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXC8P31273 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 KRT8P21-201ENST00000430398 1491 ntBASIC16.33■□□□□ 0.2
HOXC8P31273 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXC8P31273 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXC8P31273 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXC8P31273 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HOXC8P31273 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
HOXC8P31273 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
HOXC8P31273 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXC8P31273 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXC8P31273 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXC8P31273 AC019193.1-201ENST00000506678 823 ntBASIC16.32■□□□□ 0.2
HOXC8P31273 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXC8P31273 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms