Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 SAMD11P1-201ENST00000571429 661 ntBASIC14.46□□□□□ -0.09
VAPAQ9P0L0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 AC074044.1-201ENST00000609673 707 ntBASIC14.46□□□□□ -0.09
VAPAQ9P0L0 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
VAPAQ9P0L0 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 AC152010.1-201ENST00000415779 2006 ntBASIC14.46□□□□□ -0.1
VAPAQ9P0L0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
VAPAQ9P0L0 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 AL157414.3-201ENST00000624276 1954 ntBASIC14.45□□□□□ -0.1
VAPAQ9P0L0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 AC010336.2-201ENST00000564226 506 ntBASIC14.45□□□□□ -0.1
VAPAQ9P0L0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
VAPAQ9P0L0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VAPAQ9P0L0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
VAPAQ9P0L0 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms