Protein–RNA interactions for Protein: Q9NUN5

LMBRD1, Probable lysosomal cobalamin transporter, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMBRD1Q9NUN5 RN7SL828P-201ENST00000607615 303 ntBASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 AC018529.1-201ENST00000613063 361 ntBASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LMBRD1Q9NUN5 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 RPL13P2-201ENST00000440687 659 ntBASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 ALG1L8P-201ENST00000533887 760 ntBASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 AL121723.1-201ENST00000445194 1519 ntBASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.5■□□□□ 0.39
LMBRD1Q9NUN5 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 RNA5SP416-201ENST00000516838 111 ntBASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
LMBRD1Q9NUN5 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.48■□□□□ 0.39
LMBRD1Q9NUN5 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMBRD1Q9NUN5 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC17.48■□□□□ 0.39
LMBRD1Q9NUN5 KRT8P22-201ENST00000562317 1415 ntBASIC17.48■□□□□ 0.39
LMBRD1Q9NUN5 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC17.48■□□□□ 0.39
LMBRD1Q9NUN5 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMBRD1Q9NUN5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LMBRD1Q9NUN5 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC17.48■□□□□ 0.39
LMBRD1Q9NUN5 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LMBRD1Q9NUN5 AC015818.8-201ENST00000587907 1519 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms