Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 LINC00528-201ENST00000600723 2160 ntBASIC14.53□□□□□ -0.08
BBS4Q96RK4 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 SPDYE19P-201ENST00000338590 713 ntBASIC14.53□□□□□ -0.08
BBS4Q96RK4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 RARRES2P5-201ENST00000564013 466 ntBASIC14.53□□□□□ -0.08
BBS4Q96RK4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 AC011467.4-201ENST00000594891 528 ntBASIC14.53□□□□□ -0.08
BBS4Q96RK4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
BBS4Q96RK4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
BBS4Q96RK4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.52□□□□□ -0.08
BBS4Q96RK4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.52□□□□□ -0.08
BBS4Q96RK4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.52□□□□□ -0.08
BBS4Q96RK4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.52□□□□□ -0.08
BBS4Q96RK4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
BBS4Q96RK4 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
BBS4Q96RK4 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 CLK3P2-201ENST00000427566 1453 ntBASIC14.52□□□□□ -0.08
BBS4Q96RK4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
BBS4Q96RK4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.52□□□□□ -0.08
BBS4Q96RK4 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
BBS4Q96RK4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.52□□□□□ -0.08
BBS4Q96RK4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
BBS4Q96RK4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BBS4Q96RK4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 MRPS18AP1-201ENST00000414458 589 ntBASIC14.52□□□□□ -0.09
BBS4Q96RK4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 AC004066.1-201ENST00000502488 802 ntBASIC14.52□□□□□ -0.09
BBS4Q96RK4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.52□□□□□ -0.09
BBS4Q96RK4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BBS4Q96RK4 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BBS4Q96RK4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.51□□□□□ -0.09
BBS4Q96RK4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.51□□□□□ -0.09
BBS4Q96RK4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BBS4Q96RK4 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
BBS4Q96RK4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms