Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.07■□□□□ 0.48
NEK1Q96PY6 AC133539.2-201ENST00000604757 467 ntBASIC18.07■□□□□ 0.48
NEK1Q96PY6 AC012645.4-201ENST00000610691 1061 ntBASIC18.07■□□□□ 0.48
NEK1Q96PY6 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEK1Q96PY6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEK1Q96PY6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEK1Q96PY6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NEK1Q96PY6 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NEK1Q96PY6 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.07■□□□□ 0.48
NEK1Q96PY6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 HNRNPA1P48-201ENST00000562726 1377 ntBASIC18.06■□□□□ 0.48
NEK1Q96PY6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 AL137783.1-201ENST00000623494 1896 ntBASIC18.06■□□□□ 0.48
NEK1Q96PY6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 NSL1-201ENST00000366976 722 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 SOCS2P1-201ENST00000417727 557 ntBASIC18.06■□□□□ 0.48
NEK1Q96PY6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 AP001582.1-201ENST00000525856 295 ntBASIC18.06■□□□□ 0.48
NEK1Q96PY6 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NEK1Q96PY6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.06■□□□□ 0.48
NEK1Q96PY6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 AL390755.1-201ENST00000623716 2027 ntBASIC18.05■□□□□ 0.48
NEK1Q96PY6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.05■□□□□ 0.48
NEK1Q96PY6 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
NEK1Q96PY6 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
NEK1Q96PY6 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.05■□□□□ 0.48
NEK1Q96PY6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.05■□□□□ 0.48
NEK1Q96PY6 AC005225.4-201ENST00000557330 545 ntBASIC18.05■□□□□ 0.48
NEK1Q96PY6 AC140912.1-201ENST00000577171 1054 ntBASIC18.05■□□□□ 0.48
NEK1Q96PY6 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.05■□□□□ 0.48
NEK1Q96PY6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
NEK1Q96PY6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.05■□□□□ 0.48
NEK1Q96PY6 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NEK1Q96PY6 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC18.05■□□□□ 0.48
NEK1Q96PY6 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.05■□□□□ 0.48
NEK1Q96PY6 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEK1Q96PY6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.04■□□□□ 0.48
NEK1Q96PY6 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms