Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.49□□□□□ -0.09
NCK1P16333 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
NCK1P16333 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 AL450487.1-201ENST00000426799 995 ntBASIC14.49□□□□□ -0.09
NCK1P16333 AC069335.1-201ENST00000489972 472 ntBASIC14.49□□□□□ -0.09
NCK1P16333 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
NCK1P16333 KRT8P23-201ENST00000560090 1207 ntBASIC14.49□□□□□ -0.09
NCK1P16333 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 AC015802.1-201ENST00000588104 1449 ntBASIC14.49□□□□□ -0.09
NCK1P16333 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NCK1P16333 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NCK1P16333 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.49□□□□□ -0.09
NCK1P16333 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NCK1P16333 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.48□□□□□ -0.09
NCK1P16333 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.48□□□□□ -0.09
NCK1P16333 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
NCK1P16333 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
NCK1P16333 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.48□□□□□ -0.09
NCK1P16333 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.48□□□□□ -0.09
NCK1P16333 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NCK1P16333 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.48□□□□□ -0.09
NCK1P16333 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.48□□□□□ -0.09
NCK1P16333 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.48□□□□□ -0.09
NCK1P16333 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NCK1P16333 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.48□□□□□ -0.09
NCK1P16333 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.48□□□□□ -0.09
NCK1P16333 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.48□□□□□ -0.09
NCK1P16333 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.48□□□□□ -0.09
NCK1P16333 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.48□□□□□ -0.09
NCK1P16333 AC105021.1-202ENST00000570572 669 ntBASIC14.48□□□□□ -0.09
NCK1P16333 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.48□□□□□ -0.09
NCK1P16333 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.48□□□□□ -0.09
NCK1P16333 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NCK1P16333 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
NCK1P16333 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.48□□□□□ -0.09
NCK1P16333 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
NCK1P16333 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NCK1P16333 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.47□□□□□ -0.09
NCK1P16333 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
NCK1P16333 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
NCK1P16333 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.47□□□□□ -0.09
NCK1P16333 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms