Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEP78395 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.5■□□□□ 0.07
PRAMEP78395 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PRAMEP78395 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PRAMEP78395 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
PRAMEP78395 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.5■□□□□ 0.07
PRAMEP78395 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.5■□□□□ 0.07
PRAMEP78395 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.5■□□□□ 0.07
PRAMEP78395 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.49■□□□□ 0.07
PRAMEP78395 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.49■□□□□ 0.07
PRAMEP78395 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 AC139749.1-202ENST00000617529 3139 ntBASIC15.49■□□□□ 0.07
PRAMEP78395 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 AC106881.1-201ENST00000605849 3329 ntBASIC15.49■□□□□ 0.07
PRAMEP78395 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC15.49■□□□□ 0.07
PRAMEP78395 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PRAMEP78395 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.49■□□□□ 0.07
PRAMEP78395 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.49■□□□□ 0.07
PRAMEP78395 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
PRAMEP78395 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.49■□□□□ 0.07
PRAMEP78395 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.49■□□□□ 0.07
PRAMEP78395 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 SRD5A3P1-201ENST00000603021 949 ntBASIC15.49■□□□□ 0.07
PRAMEP78395 AC000095.1-201ENST00000603208 874 ntBASIC15.49■□□□□ 0.07
PRAMEP78395 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.49■□□□□ 0.07
PRAMEP78395 AL158212.4-201ENST00000624062 1286 ntBASIC15.49■□□□□ 0.07
PRAMEP78395 AC004840.1-201ENST00000636359 365 ntBASIC15.49■□□□□ 0.07
PRAMEP78395 AL645728.2-202ENST00000641679 227 ntBASIC15.49■□□□□ 0.07
PRAMEP78395 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.49■□□□□ 0.07
PRAMEP78395 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 ZBED1P1-201ENST00000502364 1930 ntBASIC15.49■□□□□ 0.07
PRAMEP78395 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PRAMEP78395 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.49■□□□□ 0.07
PRAMEP78395 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PRAMEP78395 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEP78395 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
PRAMEP78395 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
PRAMEP78395 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
PRAMEP78395 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.48■□□□□ 0.07
PRAMEP78395 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
PRAMEP78395 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.48■□□□□ 0.07
PRAMEP78395 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
PRAMEP78395 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.48■□□□□ 0.07
PRAMEP78395 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEP78395 SPDYE18-201ENST00000510091 1050 ntBASIC15.48■□□□□ 0.07
PRAMEP78395 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEP78395 AC104794.3-201ENST00000566840 1248 ntBASIC15.48■□□□□ 0.07
PRAMEP78395 AC005498.2-205ENST00000593218 784 ntBASIC15.48■□□□□ 0.07
PRAMEP78395 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.48■□□□□ 0.07
PRAMEP78395 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEP78395 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEP78395 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.48■□□□□ 0.07
PRAMEP78395 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PRAMEP78395 ABR-205ENST00000544583 5595 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms