Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.36□□□□□ -0.27
XRCC2O43543 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 FAM8A3P-201ENST00000427218 844 ntBASIC13.36□□□□□ -0.27
XRCC2O43543 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.36□□□□□ -0.27
XRCC2O43543 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 AC009407.1-201ENST00000568958 598 ntBASIC13.36□□□□□ -0.27
XRCC2O43543 AC036164.1-201ENST00000570544 333 ntBASIC13.36□□□□□ -0.27
XRCC2O43543 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.36□□□□□ -0.27
XRCC2O43543 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
XRCC2O43543 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 SRD5A3P1-201ENST00000603021 949 ntBASIC13.36□□□□□ -0.27
XRCC2O43543 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.36□□□□□ -0.27
XRCC2O43543 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.36□□□□□ -0.27
XRCC2O43543 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
XRCC2O43543 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
XRCC2O43543 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.35□□□□□ -0.27
XRCC2O43543 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.35□□□□□ -0.27
XRCC2O43543 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.35□□□□□ -0.27
XRCC2O43543 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
XRCC2O43543 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.35□□□□□ -0.27
XRCC2O43543 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
XRCC2O43543 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.35□□□□□ -0.27
XRCC2O43543 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
XRCC2O43543 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
XRCC2O43543 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
XRCC2O43543 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.35□□□□□ -0.27
XRCC2O43543 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.35□□□□□ -0.27
XRCC2O43543 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.35□□□□□ -0.27
XRCC2O43543 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.35□□□□□ -0.27
XRCC2O43543 AC008738.7-201ENST00000609744 511 ntBASIC13.35□□□□□ -0.27
XRCC2O43543 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.35□□□□□ -0.27
XRCC2O43543 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
XRCC2O43543 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.35□□□□□ -0.27
XRCC2O43543 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.35□□□□□ -0.27
XRCC2O43543 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
XRCC2O43543 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms