Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AC152010.1-201ENST00000415779 2006 ntBASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.23□□□□□ -0.29
TRAV18A0A075B6X5 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 HLA-H-201ENST00000383620 1096 ntBASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAV18A0A075B6X5 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 AKAP8P1-201ENST00000434743 1349 ntBASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 AC093909.1-201ENST00000504731 1122 ntBASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 AC079776.4-201ENST00000511039 504 ntBASIC13.21□□□□□ -0.29
TRAV18A0A075B6X5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms