Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC21.21■□□□□ 0.99
CCDC7Q96M83 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC7Q96M83 BCYRN1-201ENST00000418539 200 ntBASIC21.21■□□□□ 0.99
CCDC7Q96M83 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC7Q96M83 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC21.21■□□□□ 0.99
CCDC7Q96M83 AP000812.2-201ENST00000538934 718 ntBASIC21.21■□□□□ 0.99
CCDC7Q96M83 PTP4A1P2-201ENST00000546033 454 ntBASIC21.21■□□□□ 0.99
CCDC7Q96M83 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC21.21■□□□□ 0.99
CCDC7Q96M83 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC7Q96M83 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CCDC7Q96M83 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC21.2■□□□□ 0.99
CCDC7Q96M83 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
CCDC7Q96M83 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC21.2■□□□□ 0.99
CCDC7Q96M83 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 AL137783.1-201ENST00000623494 1896 ntBASIC21.2■□□□□ 0.98
CCDC7Q96M83 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 GZMB-202ENST00000382540 816 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 BRWD1P1-201ENST00000401091 371 ntBASIC21.2■□□□□ 0.98
CCDC7Q96M83 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 RPL28-203ENST00000428193 573 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 AP001889.1-201ENST00000525414 633 ntBASIC21.2■□□□□ 0.98
CCDC7Q96M83 ENPP7P5-201ENST00000541031 1031 ntBASIC21.2■□□□□ 0.98
CCDC7Q96M83 RPL28-207ENST00000558815 616 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 DUX4L47-201ENST00000566374 394 ntBASIC21.2■□□□□ 0.98
CCDC7Q96M83 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC7Q96M83 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CCDC7Q96M83 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 SF1-209ENST00000433274 2317 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 CICP14-201ENST00000629111 2732 ntBASIC21.19■□□□□ 0.98
CCDC7Q96M83 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 MPV17-206ENST00000402722 827 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 EIF3FP3-201ENST00000434851 1086 ntBASIC21.19■□□□□ 0.98
CCDC7Q96M83 BCRP2-202ENST00000447763 634 ntBASIC21.19■□□□□ 0.98
CCDC7Q96M83 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 BCRP6-201ENST00000510112 632 ntBASIC21.19■□□□□ 0.98
CCDC7Q96M83 BCRP7-201ENST00000511549 544 ntBASIC21.19■□□□□ 0.98
CCDC7Q96M83 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC7Q96M83 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC7Q96M83 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCDC7Q96M83 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms