Protein–RNA interactions for Protein: Q969T3

SNX21, Sorting nexin-21, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21Q969T3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SNX21Q969T3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SNX21Q969T3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX21Q969T3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNX21Q969T3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SNX21Q969T3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC18.11■□□□□ 0.49
SNX21Q969T3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SNX21Q969T3 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX21Q969T3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.11■□□□□ 0.49
SNX21Q969T3 SERBP1P3-201ENST00000459980 809 ntBASIC18.11■□□□□ 0.49
SNX21Q969T3 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX21Q969T3 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SNX21Q969T3 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.11■□□□□ 0.49
SNX21Q969T3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX21Q969T3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SNX21Q969T3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SNX21Q969T3 AC090505.1-201ENST00000430515 1834 ntBASIC18.11■□□□□ 0.49
SNX21Q969T3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.11■□□□□ 0.49
SNX21Q969T3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SNX21Q969T3 AC089987.1-201ENST00000551654 2209 ntBASIC18.11■□□□□ 0.49
SNX21Q969T3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNX21Q969T3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX21Q969T3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SNX21Q969T3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.1■□□□□ 0.49
SNX21Q969T3 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SNX21Q969T3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX21Q969T3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.1■□□□□ 0.49
SNX21Q969T3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SNX21Q969T3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SNX21Q969T3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SNX21Q969T3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX21Q969T3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SNX21Q969T3 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX21Q969T3 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX21Q969T3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.1■□□□□ 0.49
SNX21Q969T3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.1■□□□□ 0.49
SNX21Q969T3 MIR4453-201ENST00000584019 89 ntBASIC18.1■□□□□ 0.49
SNX21Q969T3 AL589739.1-201ENST00000607720 493 ntBASIC18.1■□□□□ 0.49
SNX21Q969T3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX21Q969T3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SNX21Q969T3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SNX21Q969T3 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SNX21Q969T3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SNX21Q969T3 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX21Q969T3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNX21Q969T3 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC18.09■□□□□ 0.49
SNX21Q969T3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC18.09■□□□□ 0.49
SNX21Q969T3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC18.09■□□□□ 0.49
SNX21Q969T3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC18.09■□□□□ 0.49
SNX21Q969T3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX21Q969T3 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.09■□□□□ 0.49
SNX21Q969T3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SNX21Q969T3 AC004461.1-201ENST00000412461 403 ntBASIC18.09■□□□□ 0.49
SNX21Q969T3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
SNX21Q969T3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.09■□□□□ 0.49
SNX21Q969T3 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.09■□□□□ 0.49
SNX21Q969T3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX21Q969T3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.09■□□□□ 0.49
SNX21Q969T3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX21Q969T3 TMEM198B-204ENST00000484016 896 ntBASIC18.09■□□□□ 0.49
SNX21Q969T3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
SNX21Q969T3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms