Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHGA11Q9Y5H2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA11Q9Y5H2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA11Q9Y5H2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHGA11Q9Y5H2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA11Q9Y5H2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA11Q9Y5H2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA11Q9Y5H2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHGA11Q9Y5H2 AC012354.3-201ENST00000623734 483 ntBASIC22.35■■□□□ 1.17
PCDHGA11Q9Y5H2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA11Q9Y5H2 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA11Q9Y5H2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA11Q9Y5H2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGA11Q9Y5H2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PCDHGA11Q9Y5H2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDHGA11Q9Y5H2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHGA11Q9Y5H2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA11Q9Y5H2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA11Q9Y5H2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHGA11Q9Y5H2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHGA11Q9Y5H2 AC011551.1-201ENST00000614101 683 ntBASIC22.33■■□□□ 1.17
PCDHGA11Q9Y5H2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHGA11Q9Y5H2 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGA11Q9Y5H2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHGA11Q9Y5H2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDHGA11Q9Y5H2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA11Q9Y5H2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.32■■□□□ 1.16
PCDHGA11Q9Y5H2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA11Q9Y5H2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA11Q9Y5H2 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA11Q9Y5H2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.32■■□□□ 1.16
PCDHGA11Q9Y5H2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA11Q9Y5H2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA11Q9Y5H2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA11Q9Y5H2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA11Q9Y5H2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHGA11Q9Y5H2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA11Q9Y5H2 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA11Q9Y5H2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHGA11Q9Y5H2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA11Q9Y5H2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHGA11Q9Y5H2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PCDHGA11Q9Y5H2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.31■■□□□ 1.16
PCDHGA11Q9Y5H2 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA11Q9Y5H2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA11Q9Y5H2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PCDHGA11Q9Y5H2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA11Q9Y5H2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA11Q9Y5H2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA11Q9Y5H2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PCDHGA11Q9Y5H2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHGA11Q9Y5H2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA11Q9Y5H2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.29■■□□□ 1.16
PCDHGA11Q9Y5H2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGA11Q9Y5H2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.29■■□□□ 1.16
PCDHGA11Q9Y5H2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA11Q9Y5H2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA11Q9Y5H2 AC004812.2-201ENST00000611079 2094 ntBASIC22.29■■□□□ 1.16
PCDHGA11Q9Y5H2 AC068473.5-201ENST00000616428 2072 ntBASIC22.29■■□□□ 1.16
PCDHGA11Q9Y5H2 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PCDHGA11Q9Y5H2 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDHGA11Q9Y5H2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA11Q9Y5H2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA11Q9Y5H2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA11Q9Y5H2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PCDHGA11Q9Y5H2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PCDHGA11Q9Y5H2 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.28■■□□□ 1.16
PCDHGA11Q9Y5H2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC22.27■■□□□ 1.16
PCDHGA11Q9Y5H2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA11Q9Y5H2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
PCDHGA11Q9Y5H2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGA11Q9Y5H2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.27■■□□□ 1.16
PCDHGA11Q9Y5H2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA11Q9Y5H2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA11Q9Y5H2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.27■■□□□ 1.16
PCDHGA11Q9Y5H2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA11Q9Y5H2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA11Q9Y5H2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PCDHGA11Q9Y5H2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
PCDHGA11Q9Y5H2 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PCDHGA11Q9Y5H2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA11Q9Y5H2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.26■■□□□ 1.15
PCDHGA11Q9Y5H2 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA11Q9Y5H2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PCDHGA11Q9Y5H2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.26■■□□□ 1.15
PCDHGA11Q9Y5H2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.26■■□□□ 1.15
PCDHGA11Q9Y5H2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA11Q9Y5H2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.26■■□□□ 1.15
PCDHGA11Q9Y5H2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PCDHGA11Q9Y5H2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PCDHGA11Q9Y5H2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA11Q9Y5H2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHGA11Q9Y5H2 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
PCDHGA11Q9Y5H2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PCDHGA11Q9Y5H2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHGA11Q9Y5H2 AL033527.3-201ENST00000566366 1196 ntBASIC22.25■■□□□ 1.15
PCDHGA11Q9Y5H2 AC010980.1-201ENST00000587192 1142 ntBASIC22.25■■□□□ 1.15
PCDHGA11Q9Y5H2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA11Q9Y5H2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.25■■□□□ 1.15
PCDHGA11Q9Y5H2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms