Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NOTCH3Q9UM47 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NOTCH3Q9UM47 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NOTCH3Q9UM47 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NOTCH3Q9UM47 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NOTCH3Q9UM47 UNC93B3-201ENST00000308076 687 ntBASIC17.7■□□□□ 0.42
NOTCH3Q9UM47 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NOTCH3Q9UM47 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NOTCH3Q9UM47 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.7■□□□□ 0.42
NOTCH3Q9UM47 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NOTCH3Q9UM47 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NOTCH3Q9UM47 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NOTCH3Q9UM47 SYT6-210ENST00000641643 1587 ntBASIC17.68■□□□□ 0.42
NOTCH3Q9UM47 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NOTCH3Q9UM47 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NOTCH3Q9UM47 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.68■□□□□ 0.42
NOTCH3Q9UM47 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NOTCH3Q9UM47 AC096887.2-201ENST00000623443 1957 ntBASIC17.68■□□□□ 0.42
NOTCH3Q9UM47 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
NOTCH3Q9UM47 AC097639.1-201ENST00000565519 1891 ntBASIC17.68■□□□□ 0.42
NOTCH3Q9UM47 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NOTCH3Q9UM47 AL162430.1-201ENST00000480705 870 ntBASIC17.67■□□□□ 0.42
NOTCH3Q9UM47 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.67■□□□□ 0.42
NOTCH3Q9UM47 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.67■□□□□ 0.42
NOTCH3Q9UM47 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NOTCH3Q9UM47 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NOTCH3Q9UM47 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NOTCH3Q9UM47 LBH-205ENST00000407930 756 ntTSL 2 BASIC17.67■□□□□ 0.42
NOTCH3Q9UM47 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.67■□□□□ 0.42
NOTCH3Q9UM47 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.67■□□□□ 0.42
NOTCH3Q9UM47 AC090877.2-201ENST00000558441 1738 ntBASIC17.67■□□□□ 0.42
NOTCH3Q9UM47 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NOTCH3Q9UM47 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 AC105265.2-201ENST00000467189 838 ntBASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 AP001330.3-201ENST00000520123 633 ntBASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NOTCH3Q9UM47 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
NOTCH3Q9UM47 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.65■□□□□ 0.42
NOTCH3Q9UM47 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.65■□□□□ 0.42
NOTCH3Q9UM47 AC005703.6-201ENST00000623265 1329 ntBASIC17.65■□□□□ 0.42
NOTCH3Q9UM47 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH3Q9UM47 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.65■□□□□ 0.42
NOTCH3Q9UM47 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH3Q9UM47 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH3Q9UM47 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH3Q9UM47 MIR6722-201ENST00000617286 78 ntBASIC17.65■□□□□ 0.42
NOTCH3Q9UM47 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NOTCH3Q9UM47 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.64■□□□□ 0.42
NOTCH3Q9UM47 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH3Q9UM47 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
NOTCH3Q9UM47 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.64■□□□□ 0.41
NOTCH3Q9UM47 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH3Q9UM47 RASA4CP-201ENST00000424092 1398 ntBASIC17.64■□□□□ 0.41
NOTCH3Q9UM47 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH3Q9UM47 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NOTCH3Q9UM47 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 MIR939-201ENST00000401314 82 ntBASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 AC097381.1-201ENST00000429019 1296 ntBASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.63■□□□□ 0.41
NOTCH3Q9UM47 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NOTCH3Q9UM47 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NOTCH3Q9UM47 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NOTCH3Q9UM47 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms