Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
USP25Q9UHP3 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
USP25Q9UHP3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
USP25Q9UHP3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.38■■□□□ 1.81
USP25Q9UHP3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
USP25Q9UHP3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC26.38■■□□□ 1.81
USP25Q9UHP3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC26.37■■□□□ 1.81
USP25Q9UHP3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
USP25Q9UHP3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP25Q9UHP3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.37■■□□□ 1.81
USP25Q9UHP3 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
USP25Q9UHP3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP25Q9UHP3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP25Q9UHP3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP25Q9UHP3 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
USP25Q9UHP3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP25Q9UHP3 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP25Q9UHP3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
USP25Q9UHP3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
USP25Q9UHP3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC26.36■■□□□ 1.81
USP25Q9UHP3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.36■■□□□ 1.81
USP25Q9UHP3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
USP25Q9UHP3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP25Q9UHP3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP25Q9UHP3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP25Q9UHP3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP25Q9UHP3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
USP25Q9UHP3 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
USP25Q9UHP3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.35■■□□□ 1.81
USP25Q9UHP3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
USP25Q9UHP3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
USP25Q9UHP3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP25Q9UHP3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.34■■□□□ 1.81
USP25Q9UHP3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
USP25Q9UHP3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
USP25Q9UHP3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.34■■□□□ 1.81
USP25Q9UHP3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
USP25Q9UHP3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
USP25Q9UHP3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.33■■□□□ 1.81
USP25Q9UHP3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.33■■□□□ 1.81
USP25Q9UHP3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
USP25Q9UHP3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP25Q9UHP3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
USP25Q9UHP3 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.33■■□□□ 1.8
USP25Q9UHP3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.33■■□□□ 1.8
USP25Q9UHP3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.32■■□□□ 1.8
USP25Q9UHP3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.32■■□□□ 1.8
USP25Q9UHP3 RPS2P7-201ENST00000447334 885 ntBASIC26.32■■□□□ 1.8
USP25Q9UHP3 AC018755.3-202ENST00000596210 929 ntBASIC26.32■■□□□ 1.8
USP25Q9UHP3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.32■■□□□ 1.8
USP25Q9UHP3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
USP25Q9UHP3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
USP25Q9UHP3 AL592293.1-201ENST00000502889 1188 ntBASIC26.31■■□□□ 1.8
USP25Q9UHP3 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP25Q9UHP3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP25Q9UHP3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.31■■□□□ 1.8
USP25Q9UHP3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
USP25Q9UHP3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.31■■□□□ 1.8
USP25Q9UHP3 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
USP25Q9UHP3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
USP25Q9UHP3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.31■■□□□ 1.8
USP25Q9UHP3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USP25Q9UHP3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.3■■□□□ 1.8
USP25Q9UHP3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC26.3■■□□□ 1.8
USP25Q9UHP3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
USP25Q9UHP3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
USP25Q9UHP3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
USP25Q9UHP3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
USP25Q9UHP3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
USP25Q9UHP3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
USP25Q9UHP3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
USP25Q9UHP3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.29■■□□□ 1.8
USP25Q9UHP3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
USP25Q9UHP3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
USP25Q9UHP3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC26.29■■□□□ 1.8
USP25Q9UHP3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP25Q9UHP3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.28■■□□□ 1.8
USP25Q9UHP3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
USP25Q9UHP3 RARRES2P2-201ENST00000394842 485 ntBASIC26.28■■□□□ 1.8
USP25Q9UHP3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.28■■□□□ 1.8
USP25Q9UHP3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP25Q9UHP3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
USP25Q9UHP3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.28■■□□□ 1.8
USP25Q9UHP3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
USP25Q9UHP3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.27■■□□□ 1.8
USP25Q9UHP3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.27■■□□□ 1.8
USP25Q9UHP3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.27■■□□□ 1.8
USP25Q9UHP3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP25Q9UHP3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.27■■□□□ 1.8
USP25Q9UHP3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
USP25Q9UHP3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP25Q9UHP3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP25Q9UHP3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.26■■□□□ 1.79
USP25Q9UHP3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
USP25Q9UHP3 SPCS2P3-201ENST00000500401 656 ntBASIC26.26■■□□□ 1.79
USP25Q9UHP3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
USP25Q9UHP3 HLA-L-211ENST00000482052 1765 ntBASIC26.25■■□□□ 1.79
USP25Q9UHP3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
USP25Q9UHP3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.25■■□□□ 1.79
USP25Q9UHP3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms