Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL21A1Q96P44 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL21A1Q96P44 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL21A1Q96P44 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.75■■□□□ 1.07
COL21A1Q96P44 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
COL21A1Q96P44 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL21A1Q96P44 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL21A1Q96P44 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.75■■□□□ 1.07
COL21A1Q96P44 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL21A1Q96P44 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.75■■□□□ 1.07
COL21A1Q96P44 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
COL21A1Q96P44 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
COL21A1Q96P44 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.75■■□□□ 1.07
COL21A1Q96P44 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL21A1Q96P44 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL21A1Q96P44 AL592295.1-201ENST00000400984 884 ntBASIC21.74■■□□□ 1.07
COL21A1Q96P44 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.74■■□□□ 1.07
COL21A1Q96P44 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL21A1Q96P44 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.74■■□□□ 1.07
COL21A1Q96P44 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
COL21A1Q96P44 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
COL21A1Q96P44 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL21A1Q96P44 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.73■■□□□ 1.07
COL21A1Q96P44 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL21A1Q96P44 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL21A1Q96P44 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL21A1Q96P44 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL21A1Q96P44 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
COL21A1Q96P44 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.73■■□□□ 1.07
COL21A1Q96P44 AC022616.5-201ENST00000518796 181 ntBASIC21.73■■□□□ 1.07
COL21A1Q96P44 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL21A1Q96P44 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL21A1Q96P44 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.73■■□□□ 1.07
COL21A1Q96P44 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
COL21A1Q96P44 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL21A1Q96P44 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL21A1Q96P44 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.72■■□□□ 1.07
COL21A1Q96P44 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
COL21A1Q96P44 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.72■■□□□ 1.07
COL21A1Q96P44 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL21A1Q96P44 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL21A1Q96P44 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
COL21A1Q96P44 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL21A1Q96P44 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
COL21A1Q96P44 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL21A1Q96P44 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL21A1Q96P44 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL21A1Q96P44 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL21A1Q96P44 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
COL21A1Q96P44 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL21A1Q96P44 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL21A1Q96P44 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL21A1Q96P44 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
COL21A1Q96P44 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
COL21A1Q96P44 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.7■■□□□ 1.06
COL21A1Q96P44 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
COL21A1Q96P44 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.7■■□□□ 1.06
COL21A1Q96P44 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.7■■□□□ 1.06
COL21A1Q96P44 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.7■■□□□ 1.06
COL21A1Q96P44 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL21A1Q96P44 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.69■■□□□ 1.06
COL21A1Q96P44 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL21A1Q96P44 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
COL21A1Q96P44 AC068473.5-201ENST00000616428 2072 ntBASIC21.69■■□□□ 1.06
COL21A1Q96P44 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL21A1Q96P44 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
COL21A1Q96P44 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL21A1Q96P44 MIR4508-201ENST00000584178 70 ntBASIC21.69■■□□□ 1.06
COL21A1Q96P44 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
COL21A1Q96P44 KRT8P33-201ENST00000508125 1423 ntBASIC21.69■■□□□ 1.06
COL21A1Q96P44 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
COL21A1Q96P44 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL21A1Q96P44 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL21A1Q96P44 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL21A1Q96P44 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.69■■□□□ 1.06
COL21A1Q96P44 HLA-L-211ENST00000482052 1765 ntBASIC21.69■■□□□ 1.06
COL21A1Q96P44 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL21A1Q96P44 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL21A1Q96P44 YBX1P4-201ENST00000392794 808 ntBASIC21.68■■□□□ 1.06
COL21A1Q96P44 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.68■■□□□ 1.06
COL21A1Q96P44 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL21A1Q96P44 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.68■■□□□ 1.06
COL21A1Q96P44 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL21A1Q96P44 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL21A1Q96P44 AC004812.2-201ENST00000611079 2094 ntBASIC21.68■■□□□ 1.06
COL21A1Q96P44 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
COL21A1Q96P44 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
COL21A1Q96P44 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
COL21A1Q96P44 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.67■■□□□ 1.06
COL21A1Q96P44 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
COL21A1Q96P44 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL21A1Q96P44 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL21A1Q96P44 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COL21A1Q96P44 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
COL21A1Q96P44 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL21A1Q96P44 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL21A1Q96P44 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL21A1Q96P44 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
COL21A1Q96P44 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL21A1Q96P44 AC103834.1-201ENST00000520383 144 ntBASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms