Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB11AP62491 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB11AP62491 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11AP62491 AC025884.2-201ENST00000553429 711 ntBASIC18.65■□□□□ 0.58
RAB11AP62491 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.65■□□□□ 0.58
RAB11AP62491 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11AP62491 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.65■□□□□ 0.58
RAB11AP62491 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11AP62491 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11AP62491 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.65■□□□□ 0.58
RAB11AP62491 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RAB11AP62491 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11AP62491 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11AP62491 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11AP62491 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RAB11AP62491 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB11AP62491 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC18.64■□□□□ 0.57
RAB11AP62491 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB11AP62491 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11AP62491 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RAB11AP62491 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.64■□□□□ 0.57
RAB11AP62491 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11AP62491 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11AP62491 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11AP62491 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.63■□□□□ 0.57
RAB11AP62491 AC004812.2-201ENST00000611079 2094 ntBASIC18.63■□□□□ 0.57
RAB11AP62491 MIR3648-2-201ENST00000581792 180 ntBASIC18.63■□□□□ 0.57
RAB11AP62491 MIR3648-1-201ENST00000615959 180 ntBASIC18.63■□□□□ 0.57
RAB11AP62491 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RAB11AP62491 SMPD5-203ENST00000639008 1464 ntBASIC18.63■□□□□ 0.57
RAB11AP62491 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RAB11AP62491 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11AP62491 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11AP62491 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RAB11AP62491 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11AP62491 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11AP62491 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11AP62491 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.62■□□□□ 0.57
RAB11AP62491 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.62■□□□□ 0.57
RAB11AP62491 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11AP62491 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11AP62491 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11AP62491 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11AP62491 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB11AP62491 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB11AP62491 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RAB11AP62491 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB11AP62491 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB11AP62491 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB11AP62491 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB11AP62491 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB11AP62491 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB11AP62491 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB11AP62491 C9orf163-202ENST00000624034 2573 ntBASIC18.61■□□□□ 0.57
RAB11AP62491 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB11AP62491 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RAB11AP62491 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB11AP62491 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB11AP62491 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB11AP62491 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB11AP62491 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB11AP62491 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB11AP62491 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB11AP62491 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB11AP62491 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RAB11AP62491 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB11AP62491 AL157400.5-201ENST00000507624 621 ntBASIC18.6■□□□□ 0.57
RAB11AP62491 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
RAB11AP62491 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB11AP62491 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RAB11AP62491 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB11AP62491 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.6■□□□□ 0.57
RAB11AP62491 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB11AP62491 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB11AP62491 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11AP62491 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11AP62491 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB11AP62491 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
RAB11AP62491 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11AP62491 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11AP62491 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11AP62491 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB11AP62491 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB11AP62491 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RAB11AP62491 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB11AP62491 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB11AP62491 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB11AP62491 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RAB11AP62491 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.56
RAB11AP62491 AL117328.2-201ENST00000624617 1940 ntBASIC18.58■□□□□ 0.56
RAB11AP62491 ABCB10P4-201ENST00000566803 2184 ntBASIC18.58■□□□□ 0.56
RAB11AP62491 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB11AP62491 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB11AP62491 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11AP62491 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RAB11AP62491 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11AP62491 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RAB11AP62491 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11AP62491 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB11AP62491 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms