Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DUXBA0A1W2PPF3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DUXBA0A1W2PPF3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
DUXBA0A1W2PPF3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
DUXBA0A1W2PPF3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
DUXBA0A1W2PPF3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 CR559946.2-201ENST00000623684 991 ntBASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 AC092068.2-201ENST00000590491 1708 ntBASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
DUXBA0A1W2PPF3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
DUXBA0A1W2PPF3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.82■□□□□ 0.6
DUXBA0A1W2PPF3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.82■□□□□ 0.6
DUXBA0A1W2PPF3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC18.82■□□□□ 0.6
DUXBA0A1W2PPF3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.82■□□□□ 0.6
DUXBA0A1W2PPF3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
DUXBA0A1W2PPF3 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DUXBA0A1W2PPF3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
DUXBA0A1W2PPF3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 ANOS2P-203ENST00000472227 1816 ntBASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 DUSP8P3-201ENST00000399571 1760 ntBASIC18.81■□□□□ 0.6
DUXBA0A1W2PPF3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.8■□□□□ 0.6
DUXBA0A1W2PPF3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
DUXBA0A1W2PPF3 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DUXBA0A1W2PPF3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
DUXBA0A1W2PPF3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DUXBA0A1W2PPF3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DUXBA0A1W2PPF3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.8■□□□□ 0.6
DUXBA0A1W2PPF3 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DUXBA0A1W2PPF3 AL161729.1-201ENST00000604104 1402 ntBASIC18.8■□□□□ 0.6
DUXBA0A1W2PPF3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DUXBA0A1W2PPF3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
DUXBA0A1W2PPF3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
DUXBA0A1W2PPF3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.78■□□□□ 0.6
DUXBA0A1W2PPF3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DUXBA0A1W2PPF3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DUXBA0A1W2PPF3 ZNRF2P2-203ENST00000454624 420 ntBASIC18.78■□□□□ 0.6
DUXBA0A1W2PPF3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
DUXBA0A1W2PPF3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
DUXBA0A1W2PPF3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC18.77■□□□□ 0.6
DUXBA0A1W2PPF3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
DUXBA0A1W2PPF3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DUXBA0A1W2PPF3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.77■□□□□ 0.6
DUXBA0A1W2PPF3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
DUXBA0A1W2PPF3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
DUXBA0A1W2PPF3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
DUXBA0A1W2PPF3 AC060814.1-201ENST00000554326 538 ntBASIC18.77■□□□□ 0.6
DUXBA0A1W2PPF3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
DUXBA0A1W2PPF3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 RP9P-202ENST00000450133 1212 ntBASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
DUXBA0A1W2PPF3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.75■□□□□ 0.59
DUXBA0A1W2PPF3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DUXBA0A1W2PPF3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
DUXBA0A1W2PPF3 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DUXBA0A1W2PPF3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
DUXBA0A1W2PPF3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
DUXBA0A1W2PPF3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms