Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 ACTG1P14-201ENST00000446382 1122 ntBASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 SLC25A39P2-201ENST00000537614 270 ntBASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 AC040169.1-201ENST00000565382 521 ntBASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COMMD4Q9H0A8 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 AC015656.1-201ENST00000624209 3578 ntBASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 AL592309.1-201ENST00000443127 649 ntBASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COMMD4Q9H0A8 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms