Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB3IL1Q8TBN0 AKAP8P1-201ENST00000434743 1349 ntBASIC15.4■□□□□ 0.06
RAB3IL1Q8TBN0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB3IL1Q8TBN0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB3IL1Q8TBN0 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB3IL1Q8TBN0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RAB3IL1Q8TBN0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 AC131212.3-201ENST00000624087 4219 ntBASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 AC093909.1-201ENST00000504731 1122 ntBASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 AC112191.1-201ENST00000523689 701 ntBASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RAB3IL1Q8TBN0 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 CICP11-201ENST00000434745 2827 ntBASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.38■□□□□ 0.05
RAB3IL1Q8TBN0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms