Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC3P02656 AC073957.3-201ENST00000609998 6758 ntBASIC12.32□□□□□ -0.44
APOC3P02656 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC3P02656 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
APOC3P02656 LPO-204ENST00000543544 2350 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC3P02656 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC12.32□□□□□ -0.44
APOC3P02656 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
APOC3P02656 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.32□□□□□ -0.44
APOC3P02656 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC3P02656 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC3P02656 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC3P02656 TPT1P11-201ENST00000458482 498 ntBASIC12.32□□□□□ -0.44
APOC3P02656 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.32□□□□□ -0.44
APOC3P02656 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC3P02656 CYP2A7P1-201ENST00000595391 815 ntBASIC12.32□□□□□ -0.44
APOC3P02656 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
APOC3P02656 RALB-208ENST00000631312 311 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC3P02656 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC3P02656 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC3P02656 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC12.32□□□□□ -0.44
APOC3P02656 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
APOC3P02656 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
APOC3P02656 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC12.32□□□□□ -0.44
APOC3P02656 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC3P02656 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 AC111170.3-201ENST00000624282 2464 ntBASIC12.31□□□□□ -0.44
APOC3P02656 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.31□□□□□ -0.44
APOC3P02656 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
APOC3P02656 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC12.31□□□□□ -0.44
APOC3P02656 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.31□□□□□ -0.44
APOC3P02656 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
APOC3P02656 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 AF186192.3-201ENST00000583427 947 ntBASIC12.31□□□□□ -0.44
APOC3P02656 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC12.31□□□□□ -0.44
APOC3P02656 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
APOC3P02656 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
APOC3P02656 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 AP001282.1-201ENST00000531301 1499 ntBASIC12.31□□□□□ -0.44
APOC3P02656 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
APOC3P02656 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 SUPT20HL1-201ENST00000436466 2618 ntBASIC12.31□□□□□ -0.44
APOC3P02656 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
APOC3P02656 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 AOC4P-203ENST00000566825 2289 ntBASIC12.31□□□□□ -0.44
APOC3P02656 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC12.31□□□□□ -0.44
APOC3P02656 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
APOC3P02656 AL353692.3-201ENST00000407031 1396 ntBASIC12.3□□□□□ -0.44
APOC3P02656 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC3P02656 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
APOC3P02656 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.3□□□□□ -0.44
APOC3P02656 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
APOC3P02656 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms