Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV6-7A0A0A0MS04 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
TRBV6-7A0A0A0MS04 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRBV6-7A0A0A0MS04 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 POLD2P1-201ENST00000511220 997 ntBASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC093520.2-201ENST00000561830 333 ntBASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 MTHFR-210ENST00000641407 2387 ntBASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
TRBV6-7A0A0A0MS04 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC107918.4-201ENST00000641966 3141 ntBASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 AC004461.1-201ENST00000412461 403 ntBASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 GPS2P2-201ENST00000430745 888 ntBASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 RBPMS2P1-201ENST00000437762 623 ntBASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 SPDYE14P-201ENST00000442619 822 ntBASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 SLED1-202ENST00000512051 380 ntBASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.88□□□□□ -0.35
TRBV6-7A0A0A0MS04 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms