Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 BRI3BPP1-201ENST00000594224 787 ntBASIC16.17■□□□□ 0.18
RNF43Q68DV7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF43Q68DV7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
RNF43Q68DV7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 AC119751.2-201ENST00000504529 210 ntBASIC16.16■□□□□ 0.18
RNF43Q68DV7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 AC036164.1-201ENST00000570544 333 ntBASIC16.16■□□□□ 0.18
RNF43Q68DV7 MIR6775-201ENST00000617557 69 ntBASIC16.16■□□□□ 0.18
RNF43Q68DV7 AC068587.10-201ENST00000641210 219 ntBASIC16.16■□□□□ 0.18
RNF43Q68DV7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RNF43Q68DV7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF43Q68DV7 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms