Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 CLK3P2-201ENST00000427566 1453 ntBASIC16.42■□□□□ 0.22
CDR2Q01850 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.42■□□□□ 0.22
CDR2Q01850 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CDR2Q01850 AL512638.1-201ENST00000457493 794 ntBASIC16.42■□□□□ 0.22
CDR2Q01850 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.42■□□□□ 0.22
CDR2Q01850 AC092183.1-201ENST00000469884 875 ntBASIC16.42■□□□□ 0.22
CDR2Q01850 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.42■□□□□ 0.22
CDR2Q01850 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.42■□□□□ 0.22
CDR2Q01850 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.42■□□□□ 0.22
CDR2Q01850 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CDR2Q01850 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.42■□□□□ 0.22
CDR2Q01850 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDR2Q01850 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.42■□□□□ 0.22
CDR2Q01850 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDR2Q01850 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDR2Q01850 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.41■□□□□ 0.22
CDR2Q01850 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.41■□□□□ 0.22
CDR2Q01850 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.41■□□□□ 0.22
CDR2Q01850 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.41■□□□□ 0.22
CDR2Q01850 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CDR2Q01850 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CDR2Q01850 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 BASP1P1-201ENST00000430708 665 ntBASIC16.41■□□□□ 0.22
CDR2Q01850 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.41■□□□□ 0.22
CDR2Q01850 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.41■□□□□ 0.22
CDR2Q01850 RFPL4AP1-201ENST00000530883 850 ntBASIC16.41■□□□□ 0.22
CDR2Q01850 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.41■□□□□ 0.22
CDR2Q01850 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.41■□□□□ 0.22
CDR2Q01850 AC104794.3-201ENST00000566840 1248 ntBASIC16.41■□□□□ 0.22
CDR2Q01850 AC005498.2-205ENST00000593218 784 ntBASIC16.41■□□□□ 0.22
CDR2Q01850 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.41■□□□□ 0.22
CDR2Q01850 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDR2Q01850 AC004790.1-201ENST00000612686 536 ntBASIC16.41■□□□□ 0.22
CDR2Q01850 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.41■□□□□ 0.22
CDR2Q01850 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.41■□□□□ 0.22
CDR2Q01850 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.41■□□□□ 0.22
CDR2Q01850 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDR2Q01850 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CDR2Q01850 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.41■□□□□ 0.22
CDR2Q01850 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.41■□□□□ 0.22
CDR2Q01850 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CDR2Q01850 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.41■□□□□ 0.22
CDR2Q01850 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
CDR2Q01850 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CDR2Q01850 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.4■□□□□ 0.22
CDR2Q01850 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.4■□□□□ 0.22
CDR2Q01850 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.4■□□□□ 0.22
CDR2Q01850 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
CDR2Q01850 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.4■□□□□ 0.22
CDR2Q01850 AC106881.1-201ENST00000605849 3329 ntBASIC16.4■□□□□ 0.22
CDR2Q01850 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.4■□□□□ 0.22
CDR2Q01850 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.4■□□□□ 0.22
CDR2Q01850 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CDR2Q01850 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
CDR2Q01850 GAPDHP40-201ENST00000505218 1006 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms